Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02407 ATGGTCTTGAAGTCAATGGTTGCTTCCGCGAGCGATCTAAGTCTCGTGTCTGTTGCAGGGAACTCTCCCCTTGATTTCAAGAATCGGGTTTTCGGTGGCCGACTCATTAGCCTCGGATTTCGTTTCAACAAAGGTAGTAAATGCAAGGGGAATGAAAGGTTTAACTTTGAGGTTCGTGCAGCTGTGGAAGTGGGTGTGGAGAGATCGAAGAGTAAGGCTTTGGAGGGTGGTTTTGGGTTGGATGTGGTTTCAGAGGCAGAGTTAACAGTGAAGGGTTTTGCGGGGTTGAGGAAGACCAAACTCGTGTGCACTGTTGGTCCTGCTTGCAGCTCTTTGGAGGATCTTGAGAACTTGGCTCTTGGAGGCATGAGTGTTGCCAGGCTCAACATGTGCCATGGGACCAGGGAGTGGCACCGTGATGTGATTGGGAAGATCAAGAAGTTGAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGAGCTCCTTCCTCGGTTAAAGTTGAGGAAGGTTCAAATTGGGTGTTTACTGCTGAACATTTTGAGGGTTCTCGCCCATTCACTGTTCAAACGAATTATAGAGGTTTTTCTGAAGGTATCGAAATGGGTGATGAACTTGTAATTGATGGTGGAATGGCATGCTTTGAAGTTGTTGAAAAGACTGGAAATGATTTGCATTGCAAGTGCATAGATGCTGGTCTTTTCCTGCCTGGAGCCAAACTTAGTTTCTGGAGAGATGGAAAGCTTGTGAGAGGGAATAACAAGCTCCCCACTCTATCAACAAAGGATTGGGCTGACATTGACTTTGGTATAGCAGAGGGAGTTGATTTTTTTGCCTTATCTTTTGTCAATCATGCTGATTCTGTTAAGGATCTAAAGAACTACCTCTCTTCAAAGTCAACCAAATCCATAAAAGTTTTGGCAAAGATAGAAAGCTCAGAATCTCTTCATAAACTGGAGGAAATTGTGCGAGCTTCTGATGGGATCATGGTGGCTCGGGGTGACCTTGGGGTCGAAATACCACTTGAACAGATTCCTACGGTCCAAGAGGATATAATTTATGTATGCAGACAATTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACACCAACACGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTAGACAGTATGCTGATGCTTTGATGTTGTCTGGAGAGTCAGCTATTGGATCATATGCACAAAAAGCTTTGGCAGTCTTGGATATGGCTAGCAGTAGAATGGAATCATGGAGTCGGGAGGAAAACAGACAAAATCTTGTTAACTACCATCAACTTGGAGCATCATTGCCAGAATGCATAACTGAGCAAATATGCAATTGTGCTGTTGAAATGGGTACTTAA 1428 0.4419 MVLKSMVASASDLSLVSVAGNSPLDFKNRVFGGRLISLGFRFNKGSKCKGNERFNFEVRAAVEVGVERSKSKALEGGFGLDVVSEAELTVKGFAGLRKTKLVCTVGPACSSLEDLENLALGGMSVARLNMCHGTREWHRDVIGKIKKLNEEKGFCVSVMIDTEGSQIHVVDHGAPSSVKVEEGSNWVFTAEHFEGSRPFTVQTNYRGFSEGIEMGDELVIDGGMACFEVVEKTGNDLHCKCIDAGLFLPGAKLSFWRDGKLVRGNNKLPTLSTKDWADIDFGIAEGVDFFALSFVNHADSVKDLKNYLSSKSTKSIKVLAKIESSESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYAQKALAVLDMASSRMESWSREENRQNLVNYHQLGASLPECITEQICNCAVEMGT 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02407 475 Pfam Pyruvate kinase, barrel domain 97 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 Gene3D - 165 269 IPR015806 GO:0004743|GO:0006096
Gma10g02407 475 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Gma10g02407 475 PANTHER PYRUVATE KINASE 44 473 - -
Gma10g02407 475 SUPERFAMILY PK beta-barrel domain-like 167 254 IPR011037 -
Gma10g02407 475 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 90 440 IPR015813 GO:0003824
Gma10g02407 475 Gene3D - 97 436 IPR040442 -
Gma10g02407 475 PANTHER PYRUVATE KINASE 44 473 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 TIGRFAM pyruv_kin: pyruvate kinase 97 473 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 Gene3D - 437 473 IPR036918 -
Gma10g02407 475 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 PRINTS Pyruvate kinase family signature 154 170 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma10g02407 475 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02407 Gma-Chr10 51682586 51686894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02407 K00873 - gmx:100797214 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02407 10 51682586 51686894 Gma20g01301 20 39726972 39735126 GST
Gma01g02030 01 55719788 55726167 Gma10g02407 10 51682586 51686894 PCT