Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02240 ATGGTTAAGGTAACTATAGTTGGAAGGGTAAGCGATGGATTACCTCTAGCACAAGGATTGAGATATATGAATGAAGAGAATGGATATCTTTCATGTTACAGGCAACAAGCAGAGTTCATACTCCAAGAATTTTCAAGGGGAGCATTAACAGCTTCCAAGATGACTATTCATATTGATAATTTCTGCTTTAACTACTTGGTCGAGAATGGAGTTGTTTTCATTGTGTTGTGTGAGTTCACGTACCCAAGAAAACTGGCCTTCCATTACCTACAAGATATACAAAAGGAATTTGAGAAGTTTGATAAAACCCTCATAGGCAAAATCACAAGGCCATACAGCTTTGTCAAATTTGATGGTATAATTGCAAACATTAGCAGACAATACATCGATACAAGAACTCAGGCCAACCTATCAAAACTTAATGCTAACCGGAAACAAGATTTAGACATTGCCACTGAAGACATTTACAACATTTTAGAAAGGAAGAGAAATTCAGAAACAATGAGAAGCTCACCGGTTACTCTTCTGCCTGAATCCACAATATGGTGTTCCCCACGCCTTGAGGTGATTGCGTTGAAATGGACACCTGTTATGATCATTGTCATTACTTCTATGGCTCTTCTATGGGCTAGCTTAGCCGACTTTATTGTTTAA 654 0.3807 MVKVTIVGRVSDGLPLAQGLRYMNEENGYLSCYRQQAEFILQEFSRGALTASKMTIHIDNFCFNYLVENGVVFIVLCEFTYPRKLAFHYLQDIQKEFEKFDKTLIGKITRPYSFVKFDGIIANISRQYIDTRTQANLSKLNANRKQDLDIATEDIYNILERKRNSETMRSSPVTLLPESTIWCSPRLEVIALKWTPVMIIVITSMALLWASLADFIV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02240 217 ProSiteProfiles Longin domain profile. 6 121 IPR010908 -
Gma10g02240 217 PANTHER SNARE-LIKE SUPERFAMILY PROTEIN 1 213 - -
Gma10g02240 217 CDD Longin 5 128 IPR010908 -
Gma10g02240 217 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Gma10g02240 217 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 213 IPR044565 GO:0005484|GO:0006888|GO:0006890
Gma10g02240 217 Pfam Regulated-SNARE-like domain 39 118 IPR010908 -
Gma10g02240 217 Gene3D Longin domain 1 129 - -
Gma10g02240 217 SMART Longin_2 36 120 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02240 Gma-Chr10 49979353 49981174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02240 K08517 - gmx:100781527 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02240 10 49979353 49981174 Gma10g02240 10 49979353 49981174 ECH
Gma10g02240 10 49979353 49981174 Gma20g01480 20 41916935 41918520 GST