Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02238 ATGACAGAGGAGCAATCCAAAAAGGTGGCTGAGACTGAGAGTTTTCCCTCTAATCCTGCACCTGAACCTGTTGTTGTTCCAAAGGAGGATGTGGCAGAGGAGAAATCTGTAATTCCACAACCCTCTCCCTCTCCTGCTGATGAGTCCAAAGCTCTTGTCATAGTTGAGAAGACTAGTGAAGTTGCTGAAGAGAAACCGATTGAGGGGTCTGTGAACCGAGATGCTGTGCTTGCAAGAGTTGCAACCGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAGTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGCTGCAGCGGAGGCAGAATTGAGAAAGATTGAAGAACAACTGGAGAAGAAAAAAGCAGAATATGGAGAGAAATTGAAAAACAAAATAGCTACAATCCACCGAGAAGCTGAAGAAAAGAGAGCATTTATTGAGGCCCAAAAAGGGGAAGAATTCTTGAAGGCAGAGGAGACTGCTGCAAAGTACAGGGCAACTGGAACAGCCCCAACGAAACTCTTTGGTTGTTTCTAA 585 0.4444 MTEEQSKKVAETESFPSNPAPEPVVVPKEDVAEEKSVIPQPSPSPADESKALVIVEKTSEVAEEKPIEGSVNRDAVLARVATEKRLSLIKAWEESEKSKADNKSHKKLSAISAWENSKKAAAEAELRKIEEQLEKKKAEYGEKLKNKIATIHREAEEKRAFIEAQKGEEFLKAEETAAKYRATGTAPTKLFGCF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02238 194 Pfam Remorin, C-terminal region 84 189 IPR005516 -
Gma10g02238 194 Pfam Remorin, N-terminal region 29 80 IPR005518 -
Gma10g02238 194 MobiDBLite consensus disorder prediction 1 50 - -
Gma10g02238 194 PANTHER REMORIN 1.4 3 194 - -
Gma10g02238 194 Coils Coil 119 150 - -
Gma10g02238 194 PANTHER OS02G0117200 PROTEIN 3 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02238 Gma-Chr10 49971377 49974260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02238 - - gmx:100305501 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00666 07 6922609 6927052 Gma10g02238 10 49971377 49974260 ECH
Gma18g02127 18 54955877 54960748 Gma10g02238 10 49971377 49974260 ECH
Gma01g02185 01 57115461 57117903 Gma10g02238 10 49971377 49974260 ECH
Gma11g00231 11 1808347 1811898 Gma10g02238 10 49971377 49974260 ECH
Gma10g02238 10 49971377 49974260 Gma10g02238 10 49971377 49974260 ECH
Gma10g02238 10 49971377 49974260 Gma20g01482 20 41927814 41930283 GST
Gma10g02238 10 49971377 49974260 Gma16g01586 16 36512778 36516241 PCT
Gma10g02238 10 49971377 49974260 Gma09g01337 09 36156107 36159111 PCT