Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02185 ATGGGAGAAGAGGTGTCTAGCAAAACCGAACCAGAGCTACACTGTGTGGACTCTGTTCCTGAAGAGCATAATTCCTCTGTTCAGGAAAAAGAATTGGAGAAACCTGAACCTCCAAACGACAAGGTCACTCCTCCTTCTCCAGCTGCTGCTCAAGAGGTTGCAGATCATGCTAGTAAAAAGGACACAGAGGAGTCACTTGACAAAGATGCTATGCTTGCAAGAGTTGTAACAGAGAAAAGGTTGGCTTTAGTTAAAGCATGGGAAGAAAGTGAAAAGACAAAAGCAGAGAACAGGGCATACAAGAGACTCTCTGCTGTTGGATTTTGGGAGGATAGCAAGAAAGCATCAGTAGAGGCACAACTCAAGAAAATCGAGGAAAACTTGGAAAAAAAGAAGGCCGAATATGTTGAGAAAATGAAGAATAAAGTTGCTAAAATCCACCTGTTAGCAGAAGAGAAAAGAGCAGTTGTTGAGGCTCAGAAGAGGGAAGAATTTATCGACTTAGAGGAGACAGCTTCAAAGTTTCGTAGCCGTGGAGATACGCCAAGGAGATTCTTTGCATGCTTTAGTGGCTAG 576 0.4323 MGEEVSSKTEPELHCVDSVPEEHNSSVQEKELEKPEPPNDKVTPPSPAAAQEVADHASKKDTEESLDKDAMLARVVTEKRLALVKAWEESEKTKAENRAYKRLSAVGFWEDSKKASVEAQLKKIEENLEKKKAEYVEKMKNKVAKIHLLAEEKRAVVEAQKREEFIDLEETASKFRSRGDTPRRFFACFSG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02185 191 Pfam Remorin, C-terminal region 79 183 IPR005516 -
Gma01g02185 191 MobiDBLite consensus disorder prediction 54 69 - -
Gma01g02185 191 PANTHER OS02G0117200 PROTEIN 1 190 - -
Gma01g02185 191 Coils Coil 114 145 - -
Gma01g02185 191 MobiDBLite consensus disorder prediction 1 69 - -
Gma01g02185 191 MobiDBLite consensus disorder prediction 1 38 - -
Gma01g02185 191 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02185 Gma-Chr1 57115461 57117903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02185 - - gmx:100815301 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02185 01 57115461 57117903 Gma01g02185 01 57115461 57117903 ECH
Gma01g02185 01 57115461 57117903 Gma10g02238 10 49971377 49974260 ECH
Gma01g02185 01 57115461 57117903 Gma07g00666 07 6922609 6927052 ECH
Gma01g02185 01 57115461 57117903 Gma18g02127 18 54955877 54960748 ECH
Gma01g02185 01 57115461 57117903 Gma11g00231 11 1808347 1811898 GST