Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01624 ATGGATGTTTCCCATTCCACAATCCTCATCAGTTTCACTTTCTTGCTATTCCTACCTTCTTCCAAACCAGTTTCCGATTATAGCACATTAGTCTACAAAACCTGTGCAAGCCAAACCTTCAACGACCAATTATTATCTCAAACACTCAACTCTCTGTTCCAACAACTCATTGCACAATCCTCCCAACACAAGTTCTTCAAAACCACGGAAGCTGTTAGCGACGACACAGCCATCTCCGGCCTTTTCCAATGTAGAGATGATATCAGCAATGAAGATTGTTTCAGCTGCGTAAACTTGCTGCCTCAGATGTCAAACACCTTGTGCAGTGAATCCATATCAGCACGGGTTCAGCTTGACGGTTGCTACATTCACTACGAGACAGAGGAACTTCCCGAACCAGAAACAAAAAGTGAATCTAAAAGTAGAAATTTGATTATTCACAATGAGTGTGGGGAACCGGTTGTGGATTATATCAAGTTTAAAGAGTTGATGGACGAGGCGTTTGTGAATCTGGAAAGTGGGATCCTAAACAGTAATGGGTACTATGCAATGAACTATAAATCAGTGAAATTGATGGCGCAGTGTGAAGGGGATTCAGATATTTGTGACTGTAGCAATTGCGTGAGCGATGCAGTGCAGGTTGCAAAGGAAGAATGCGGAACTCCACTTTCGGCACGAATATATCTTGACAAGTGTTTCATAAGCTACTATAACATTCCTCGCAACTTTGTCCCAGGAGCAAGAAGAAATAACAACACCGAAAAGTTGGCAGCAATAATTGTTGGAGGGGCCGCAACTCTGTTTTTGGGTTTTGCTTTTTTATCACTGCTTAACTCTCGGTTTAGAAAAGACGATTATGAATAG 864 0.419 MDVSHSTILISFTFLLFLPSSKPVSDYSTLVYKTCASQTFNDQLLSQTLNSLFQQLIAQSSQHKFFKTTEAVSDDTAISGLFQCRDDISNEDCFSCVNLLPQMSNTLCSESISARVQLDGCYIHYETEELPEPETKSESKSRNLIIHNECGEPVVDYIKFKELMDEAFVNLESGILNSNGYYAMNYKSVKLMAQCEGDSDICDCSNCVSDAVQVAKEECGTPLSARIYLDKCFISYYNIPRNFVPGARRNNNTEKLAAIIVGGAATLFLGFAFLSLLNSRFRKDDYE 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01624 287 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 286 - -
Gma10g01624 287 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Gma10g01624 287 Gene3D - 27 129 IPR038408 -
Gma10g01624 287 Gene3D - 150 240 IPR038408 -
Gma10g01624 287 Pfam Salt stress response/antifungal 160 237 IPR002902 -
Gma10g01624 287 Pfam Salt stress response/antifungal 43 127 IPR002902 -
Gma10g01624 287 ProSiteProfiles Gnk2-homologous domain profile. 142 241 IPR002902 -
Gma10g01624 287 PANTHER PLASMODESMATA-LOCATED PROTEIN 4 6 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01624 Gma-Chr10 43362839 43365135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01624 8 236 Receptor kinase-like Gene Family AT5G40380 27.586 1.13e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01624 - - gmx:100795973 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01624 10 43362839 43365135 Gma13g01074 13 24899614 24900782 GST
Gma03g01536 03 41605712 41607436 Gma10g01624 10 43362839 43365135 PCT
Gma10g01624 10 43362839 43365135 Gma03g01536 03 41605712 41607436 PCT