Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01536 ATGGGTATACTGAAATCAAAACACCACAAGCACACGCTCCTCTTTTTTCTTAGTATTTCGTTTCCTCTGTTTCTTCTTACACCTATTACTACCTCAGACAACACAAACTTGATCTACAAAGGTTGCGCCGACCAGAAGATGCAAGGCCAATACTCCCAGAACCTTAAACCGCTCTTGGATTCACTAGTGTCGGCGTCGGCGCAAAAGGGCTTCGCCGCGACTACACAAAACGCGCTCACGGGCGCGTACCAATGCAGAGGGGACCTCTCCAACTCCGAATGCTACAACTGCGTCAGCAAGATTCCAAACATGCTGGGGCGCCTCTGCGGCGGTGATGACGTGGCGGCGGCGCGGGTGCAGCTGAGCGGGTGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGGTGGTCCCGGCCACGCAGCTGCTGTACAAGGTGTGCGGGGCCCGCAAGGTGGTCGACGGCGGAGGGTTCGAGGCGAGGAGGGACGCGGCGTTTGGGATGGCGGAGAACGGCGTGCAGAACAGCGGAAATTTGTTCTACACGGGGAGTTACCAGAGCCTCTATGTGTTGGGGCAGTGCGAGGGTAGTTTGGGAAATGCGGATTGTGGGGGTTGTATCAAGAGTGCTGCGGAACAGGCTGGGGATCAGTGTGCTGACTCCATCTCCGCGCAGGTTTATCTCCAGAGTTGTTTTCTTAGTTATAGCTTTTACCCCAATGGTGTTCCCACCTTGTCATCTTCCTCAGGGGGAGGAGGGGGGCATCCACACACGGAGAGGACAGTGGCACTTGCGGTGGGAGGGGTGGCGGCTCTGGGATTCTTGATTGTTTGTTTGTTATTTCTCAAGTCGGTGTTGAAGAGAAGAGGTGGGAAGCGTTGA 879 0.5563 MGILKSKHHKHTLLFFLSISFPLFLLTPITTSDNTNLIYKGCADQKMQGQYSQNLKPLLDSLVSASAQKGFAATTQNALTGAYQCRGDLSNSECYNCVSKIPNMLGRLCGGDDVAAARVQLSGCYLRYEVVGFKVVPATQLLYKVCGARKVVDGGGFEARRDAAFGMAENGVQNSGNLFYTGSYQSLYVLGQCEGSLGNADCGGCIKSAAEQAGDQCADSISAQVYLQSCFLSYSFYPNGVPTLSSSSGGGGGHPHTERTVALAVGGVAALGFLIVCLLFLKSVLKRRGGKR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01536 292 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 11 289 - -
Gma03g01536 292 Pfam Salt stress response/antifungal 46 129 IPR002902 -
Gma03g01536 292 Pfam Salt stress response/antifungal 177 236 IPR002902 -
Gma03g01536 292 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 289 - -
Gma03g01536 292 ProSiteProfiles Gnk2-homologous domain profile. 33 133 IPR002902 -
Gma03g01536 292 Gene3D - 138 238 IPR038408 -
Gma03g01536 292 Gene3D - 34 133 IPR038408 -
Gma03g01536 292 ProSiteProfiles Gnk2-homologous domain profile. 139 239 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01536 Gma-Chr3 41605712 41607436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01536 23 238 Receptor kinase-like Gene Family AT4G05200 27.311 1.25e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01536 - - gmx:100786830 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01536 03 41605712 41607436 Gma03g01536 03 41605712 41607436 ECH
Gma03g01536 03 41605712 41607436 Gma10g01624 10 43362839 43365135 PCT
Gma03g01536 03 41605712 41607436 Gma13g01074 13 24899614 24900782 PCT
Gma10g01624 10 43362839 43365135 Gma03g01536 03 41605712 41607436 PCT
Gma13g01074 13 24899614 24900782 Gma03g01536 03 41605712 41607436 PCT