Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01025 ATGCTGCCGTCCCTAATCAACATCCAACCCAAGAGGTACCTAAGTTCCCCAATGGCTTCGAATGAAAAAACCCTTCCTCATCAAACCCAAGTGGTTCTGATACCTTTCCCTGCACAAGGCCATCTCAATCAGCTTCTGCACCTCGCACGCCATATTTTTTCACACAACATACCAGTTCATTATGTTGGCACTGCCACACACATTCGTCAGGCCACACTTCGAGACCACAACTCCAATATTTCTAACATAATTATTCATTTCCATGCCTTTGAAGTTCCACCCTTTGTATCCCCTCCTCCCAACCCCAACAATGAAGAAACCGATTTCCCATCTCATCTACTTCCTTCATTTAAGGCCTCTTCGCATCTTCGCGAGCCTGTGAGGAATCTTCTTCAGTCCCTCTCATCTCAAGCCAAAAGGGTCATTGTCATCCATGACTCGTTAATGGCATCAGTGGCACAAGATGCCACAAACATGCCAAATGTTGAGAATTACACTTTTCACAGCACGTGTGCCTTTACCACCTTCCTTTATTATTGGGAGGTAATGGGAAGACCCCCGGTTGAAGGCTTCTTCCAAGCCACAGAAATTCCTTCTATGGGAGGATGCTTCCCACCCCAATTCATCCATTTCATTACTGAAGAGTATGAGTTCCATCAATTCAACGACGGCAACATTTACAACACAAGCAGGGCAATTGAAGGTCCTTACATAGAGTTTCTGGAGCGTATTGGTGGAAGCAAGAAGAGGCTTTGGGCACTGGGGCCTTTCAACCCTTTAACCATTGAGAAGAAAGATCCAAAAACAAGACACATATGCATAGAGTGGCTTGATAAACAAGAGGCGAATTCAGTCATGTATGTGTCTTTTGGGACAACAACAAGTTTTACAGTGGCACAATTTGAACAGATTGCAATTGGGTTGGAACAAAGCAAGCAGAAGTTCATCTGGGTGCTGAGAGATGCTGATAAAGGAAACATTTTTGATGGAAGTGAAGCAGAAAGGTATGAGCTTCCAAATGGGTTTGAGGAAAGAGTTGAAGGCATAGGGCTATTAATCAGAGACTGGGCACCCCAATTGGAAATTCTGAGCCACACTTCAACAGGGGGGTTTATGAGTCATTGTGGATGGAACTCTTGCTTAGAGAGCATAACCATGGGGGTGCCAATAGCAGCATGGCCTATGCACTCTGATCAACCAAGAAACTCAGTTTTGATCACAGAGGTGCTCAAGGTTGGGTTTGTTGTGAAGGATTGGGCACAAAGGAATGCATTGGTTAGTGCTTCAGTTGTTGAGAATGCTGTGAGAAGGTTGATGGAAACAAAGGAAGGTGATGAGATGCGGGACAGAGCAGTGAGGCTTAAAAATTGCATTCACAGGTCCAAATATGGAGGTGGAGTTTCTCGCATGGAAATGGGTTCTTTCATTGCTCACATCACTAAATAA 1446 0.4461 MLPSLINIQPKRYLSSPMASNEKTLPHQTQVVLIPFPAQGHLNQLLHLARHIFSHNIPVHYVGTATHIRQATLRDHNSNISNIIIHFHAFEVPPFVSPPPNPNNEETDFPSHLLPSFKASSHLREPVRNLLQSLSSQAKRVIVIHDSLMASVAQDATNMPNVENYTFHSTCAFTTFLYYWEVMGRPPVEGFFQATEIPSMGGCFPPQFIHFITEEYEFHQFNDGNIYNTSRAIEGPYIEFLERIGGSKKRLWALGPFNPLTIEKKDPKTRHICIEWLDKQEANSVMYVSFGTTTSFTVAQFEQIAIGLEQSKQKFIWVLRDADKGNIFDGSEAERYELPNGFEERVEGIGLLIRDWAPQLEILSHTSTGGFMSHCGWNSCLESITMGVPIAAWPMHSDQPRNSVLITEVLKVGFVVKDWAQRNALVSASVVENAVRRLMETKEGDEMRDRAVRLKNCIHRSKYGGGVSRMEMGSFIAHITK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01025 481 Gene3D Glycogen Phosphorylase B; 275 461 - -
Gma10g01025 481 CDD GT1_Gtf-like 31 455 IPR002213 GO:0008194
Gma10g01025 481 PANTHER GLYCOSYLTRANSFERASE 21 481 - -
Gma10g01025 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 31 480 - -
Gma10g01025 481 Gene3D Glycogen Phosphorylase B; 18 274 - -
Gma10g01025 481 PANTHER GLYCOSYLTRANSFERASE 21 481 - -
Gma10g01025 481 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
Gma10g01025 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 442 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01025 Gma-Chr10 27197006 27198634 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01025 32 468 Glycosyltransferase AT2G36780 29.792 1.34e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01025 K13495 K13492 gmx:100784697 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01025 10 27197006 27198634 Gma10g01025 10 27197006 27198634 ECH
Gma19g01297 19 42173891 42175603 Gma10g01025 10 27197006 27198634 PCT
Gma03g01249 03 38402941 38404857 Gma10g01025 10 27197006 27198634 PCT
Gma10g01025 10 27197006 27198634 Gma19g01297 19 42173891 42175603 PCT
Gma10g01025 10 27197006 27198634 Gma03g01249 03 38402941 38404857 PCT