Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01249 ATGCCATACCTACTTAGCATTGCTCAGAGTTACCTACCTTATCTCTGTTACTACAACTCTTCAATGGCTTCTAGCTTTCAAAGTTCACCTATGGCTTCCAACTACAGAAGCCATAATAAGAAAAGCCACGACAGTGACATGTTCCATCCAACCCAAGTGGAGGTGGTTGTGGTGCCTTTCCCTGCACAAGGGCACCTCAACCAGCTTCTCCACCTCTCTCGCCTCATCTTGGCACACAACATACCCGTCCATTTTGTAGGTTCGCAGACCCACAATCGCCAAGTCATAGTTCGTGCCCAAGGTTGGGACCCAAACTCCATTTACAACATTCAAATTCACGACTTCAATGTTCCTCCTTTTGTTTCCCCTGCCCCCAACCCACATGCTGAAACAAGGTTCCCCTCACATCTTTTACCCTCCTTCGTGGCCTCCACGAGTCTCCGTGAGCCCGTGTATGCACTCTTGCAATCCCTTTCAACTGTGGCCAGAAGGGTCGTTGTCATCTATGACTCCCTCATGGCATCTGTGGTGCAAGATGCTATTCATGTGCCCAATTGTGAGAGTTACACTTTCCACAGTGTTTCTGCCTTCACCATGTTCTTGTACTTTTGGGATGCAATGGGGAGGCCCCCAGTAGAAAAAGTGTCCCACATCATCCCTGAAGTTCCTTCCCTTGAAGGGTGCTTCACAACCCAATTCATAGATTTCATCACTTCACAGTATGAGTTCCATAAGTTCAGCAAAGGGACTATATACAACACCACAAGGGCAATTGAGAGTCCTTACTTGGAGTTAATAGAGAGGATCATTAGTAGCAAGACTCATTGGGCCTTGGGGCCATTCAACCCTTTGTCCATTGAGAAGGGAGTCTATAACACAAGGCACTTCAGTGTTGAGTGGCTTGACAAGCAAGAAGCAGGGTCAGTTTTGTATGTGTCGTTTGGGACAACAACATGCTTCTCTGAGGAGCAAATCAAGGAGGTTGCAAACGGGTTGGAAAAAAGCAAGCAAAAGTTCATATGGGTGGTGAGGGATGCTGACAAGGGAGATGTGTTTGATGAGGATGGCGTGAGAACTGCTGAGCTTCCAAAGGGGTTTGAAGAGAGAGTGAAAGGCACGGGGTTGGTTGTGAGAGACTGGGCACCCCAATTGGAGATTCTAAGTCACAGTTCAACTGGTGGGTTTATGAGTCACTGTGGATGGAACTCTTGCATGGAGAGCATGACAATGGGGGTGCCAATAGTAGCATGGCCTATGCACTCTGACCAGCCTAGGAACAGGGTTTTGGTAACAGAAGTGCTCAGAGTTGGGGTGGTTGTGAAGGACTGGGACCACAGGGACGAGTTGGTGACATCATCAGATGTTGAGAATGCCGTGAGGAGATTGATGGCAACAAAAGAAGGTGATGAGATGAGACAAAGGGCAATGAACCTGAAAAATGCTATTCGCAGGTCCAAGGATGAAGGGGGTGTTTCTCGCGCGGAACTGGATGATTTCATTGCGCACGTCACTAGATAG 1518 0.4802 MPYLLSIAQSYLPYLCYYNSSMASSFQSSPMASNYRSHNKKSHDSDMFHPTQVEVVVVPFPAQGHLNQLLHLSRLILAHNIPVHFVGSQTHNRQVIVRAQGWDPNSIYNIQIHDFNVPPFVSPAPNPHAETRFPSHLLPSFVASTSLREPVYALLQSLSTVARRVVVIYDSLMASVVQDAIHVPNCESYTFHSVSAFTMFLYFWDAMGRPPVEKVSHIIPEVPSLEGCFTTQFIDFITSQYEFHKFSKGTIYNTTRAIESPYLELIERIISSKTHWALGPFNPLSIEKGVYNTRHFSVEWLDKQEAGSVLYVSFGTTTCFSEEQIKEVANGLEKSKQKFIWVVRDADKGDVFDEDGVRTAELPKGFEERVKGTGLVVRDWAPQLEILSHSSTGGFMSHCGWNSCMESMTMGVPIVAWPMHSDQPRNRVLVTEVLRVGVVVKDWDHRDELVTSSDVENAVRRLMATKEGDEMRQRAMNLKNAIRRSKDEGGVSRAELDDFIAHVTR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01249 505 Gene3D Glycogen Phosphorylase B; 295 487 - -
Gma03g01249 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 505 - -
Gma03g01249 505 ProSitePatterns UDP-glycosyltransferases signature. 380 423 IPR035595 -
Gma03g01249 505 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 308 466 IPR002213 GO:0008194
Gma03g01249 505 Gene3D Glycogen Phosphorylase B; 55 492 - -
Gma03g01249 505 PANTHER GLYCOSYLTRANSFERASE 47 505 - -
Gma03g01249 505 Coils Coil 468 488 - -
Gma03g01249 505 CDD GT1_Gtf-like 55 494 IPR002213 GO:0008194
Gma03g01249 505 PANTHER GLYCOSYLTRANSFERASE 47 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01249 Gma-Chr3 38402941 38404857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01249 52 504 Glycosyltransferase AT2G15490 29.713 1.52e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01249 K13495 K13492 gmx:100799527 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01249 03 38402941 38404857 Gma03g01249 03 38402941 38404857 ECH
Gma19g01297 19 42173891 42175603 Gma03g01249 03 38402941 38404857 GST
Gma03g01249 03 38402941 38404857 Gma10g01025 10 27197006 27198634 PCT
Gma10g01025 10 27197006 27198634 Gma03g01249 03 38402941 38404857 PCT