Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01016 ATGGGAGTAGTTAGTAATGAGTACTCAAATGGATCTGTTCAAGGCTGCAATAGTTTAGAGGAGAAGCTCGATGATCTTCGTGGCCTACTTGGCAAGGCTGATGGTGATCCTTTGAGAATTGTGAGTGTTGGTGCTGGTGCTTGGGGCAGTGTTTTTGCTGCTTTGCTGCAAGATACTTATGGCCAATTCCGTGATAAGGTGCAAATCAGGATATGGAGAAGGCCAGGAAAGACAGTTGATAGAGCCACTGCAGAGCACCTCTTCGAAGTTATCAATTCTAGGGAGGATGTGTTGAGGAGGTTGATAAGGCGCTGTGCTTATCTGAAATACGTCGAAGCCAGGCTTGGTGATAGGACTCTTCTGGCTGATGAGATTTTGAAAGATGGGTTTTGCTTGAATATGATTGACACACCACTTTGTCCATTGAAGGTGGTCACAAACTTGCAAGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCAACCGAAACACGCGAGATTTTTGAAGAGATTAGTATATATTGGAAGGAGAGAATCACAGTGCCAGTGATAATCTCTTTGGCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCCCATATTATAACCCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATATACAACAAGGAGTATGCCAATGCTCGAATATGCGGAGCAGAGAAATGGAGGAAACCTCTGGCAAAGTTTCTACGACAACCACATTTTATTGTCTGGGACAACAGTGACCTTGTCACCCATGAGATCATGGGTGGCCTGAAAAATGTCTATGCAATTGGTGCCGGAATGGTAGCAGCCCTTACCAATGAGAGTGCTACTAGCAAATCTGTCTACTTTGCACACTGCACATCAGAGATGATATTTATCACTCATTTGTTGGCTGAAGAGCCTGAGAAACTTGCAGGGCCACTATTGGCTGACACTTATGTGACTTTACTAAAAGGTCGTAACGCATGGTATGGTCAGATGTTAGCTAAGGGTGAATTAAGCCCAGACATGGGTGACAGCATCAGTGGCAAAGGAATGATTCAGGGTGTCTCTGCAGTGGAGGCATTCTTTGAACTTTTGAGCCATTCAAGCCTGAATGTGTTGCACCCAGAAGAAAACAAACCGGTTGCTCCTGTTGAACTCTGCCCCATCCTGAAGACACTGTATAAAATATTGATATCCAGGGAACAGTCATCAGAAGCTATTCTCCAAGCTCTTAGGGATGAAAATCTGAATGATCCCCGTGAACGCATTGAGATTGCACAAAGCCATGCTTTCTACATGCCTTCACTTCTTGGACAACCTTGA 1377 0.443 MGVVSNEYSNGSVQGCNSLEEKLDDLRGLLGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKVQIRIWRRPGKTVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISIYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEIMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQGVSAVEAFFELLSHSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSEAILQALRDENLNDPRERIEIAQSHAFYMPSLLGQP 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01016 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 9 458 - -
Gma10g01016 458 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 270 IPR036291 -
Gma10g01016 458 Gene3D - 130 266 - -
Gma10g01016 458 Gene3D - 270 430 IPR013328 GO:0016491
Gma10g01016 458 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 270 425 IPR008927 -
Gma10g01016 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 142 244 IPR011128 GO:0016616|GO:0046168|GO:0051287
Gma10g01016 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 42 59 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gma10g01016 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 263 287 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gma10g01016 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 270 424 IPR006109 GO:0004367|GO:0005975
Gma10g01016 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 9 458 - -
Gma10g01016 458 Gene3D - 21 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01016 Gma-Chr10 26841502 26847306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01016 9 458 Acyl Lipid Metabolism Gene Families AT2G41540 88.274 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01016 K00006 - gmx:100794592 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01016 10 26841502 26847306 Gma10g01016 10 26841502 26847306 ECH
Gma10g01016 10 26841502 26847306 Gma02g01756 02 39703876 39709768 GST
Gma19g01291 19 42104270 42107859 Gma10g01016 10 26841502 26847306 PCT
Gma03g01241 03 38333526 38337976 Gma10g01016 10 26841502 26847306 PCT
Gma10g01016 10 26841502 26847306 Gma19g01291 19 42104270 42107859 PCT
Gma10g01016 10 26841502 26847306 Gma03g01241 03 38333526 38337976 PCT