Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01241 ATGGTGGGGAGCATTATGGGAGTGGTTCACAATGCATACACAAATGGAAGTGTTGGTGTACAAAATTGTAATGGGGTGGAGGAGAAGCTTGATTGTTTGAGAAGGCTAATTGGGAAGGGTGATGGTGACCCTTTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCATTGCTACAAGACACTTATGGCCAATTTAGGGACAAAATACAGATCAGGATATGGAGAAGGGCAGGAAGGGCAGTGGATAGAGCCACTGCTGAGCATCTCTTTGAGGTCATCAACTCAAGGGAGGATGTGTTGAGGAGGTTGATCCGCCGTTGCGCTTATCTCAAGTATGTTGAGGCAAGGCTTGGTGATAGGACACTCTTTGCAGATGAGATTCTCAAAGATGGTTTTTGCTTGAACATGATTGAAACACCACTTTGTCCTTTGAAGGTTGTCACAAACTTGCAAGAAGCTGTTTGGGATGCTGATATTGTTGTCAATGGCTTGCCTTCAACTGAAACAAGAGAGATCTTTGAGGAGATTAGTAAGTATTGGAAGGAGAGGATCACAGTGCCTATAATTATCTCTTTGTCAAAAGGTATAGAGGCTGCATTGGAGCCTGTTCCACATATTATAACTCCAACAAAGATGATTAACCAAGCAACTAGAGTGCCTATGGAGAACATACTCTATCTTGGTGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCAAGAATCTGTGGAGCTGAGAAATGGCGGAAACCTCTGGCGAAGTTTTTACGACAACCACACTTTATTGTCTGGGATAACAGTGACCTCGTCACGCATGAGGTCATGGGTGGCTTGAAAAATGTCTATGCAATAGGAGCTGGAATGGTAGCTGCCCTTACCAATGAGAGTGCTACAAGCAAATCTGTGTACTTTGCACACTGCACGTCGGAAATGATATTTATCACTCATTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGGCCATTGCTAGCTGACACTTATGTGACCTTGTTAAAAGGCCGTAACGCTTGGTATGGCCAGATGTTAGCTAAGGGTCAATTAAGACCAGACATGGGTGACAGTATTAGTGGCAAAGGAATGATTCAGGGAGTGTCAGCAGTGGAGGCATTCTTTGAACTTCTGAGCCAATCTAGCCTGAATGTGTTGCATCCTGAAGAAAACAAACCTGTTGCTCCTGTAGAGCTCTGCCCTATCTTGAAGACACTCTACAAAATTTTGATATCAAGGGAACAGTCATCACAAGCTATTCTGAAAGCCTTGAGGGATGAAAATCTGAATGATCCTCGTGAACGAATTGAGATTGCACAAAGCCATGTTTTCTACAAGCCTTCACTTCTTGGACAACCCTGA 1398 0.4385 MVGSIMGVVHNAYTNGSVGVQNCNGVEEKLDCLRRLIGKGDGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKIQIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIETPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPVPHIITPTKMINQATRVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLRPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHVFYKPSLLGQP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01241 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 49 66 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gma03g01241 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 270 294 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gma03g01241 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 465 - -
Gma03g01241 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 149 251 IPR011128 GO:0016616|GO:0046168|GO:0051287
Gma03g01241 465 Gene3D - 27 108 - -
Gma03g01241 465 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 277 432 IPR008927 -
Gma03g01241 465 Gene3D - 138 273 - -
Gma03g01241 465 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 277 IPR036291 -
Gma03g01241 465 Gene3D - 277 437 IPR013328 GO:0016491
Gma03g01241 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 465 - -
Gma03g01241 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 277 431 IPR006109 GO:0004367|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01241 Gma-Chr3 38333526 38337976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01241 1 465 Acyl Lipid Metabolism Gene Families AT2G41540 87.097 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01241 K00006 - gmx:100810871 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01241 03 38333526 38337976 Gma03g01241 03 38333526 38337976 ECH
Gma19g01291 19 42104270 42107859 Gma03g01241 03 38333526 38337976 GST
Gma03g01241 03 38333526 38337976 Gma10g01016 10 26841502 26847306 PCT
Gma03g01241 03 38333526 38337976 Gma02g01756 02 39703876 39709768 PCT
Gma10g01016 10 26841502 26847306 Gma03g01241 03 38333526 38337976 PCT
Gma02g01756 02 39703876 39709768 Gma03g01241 03 38333526 38337976 PCT