Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00800 ATGGCTTCGGAAGTAGTCCCATCTTCCGGGGATTTGTTGAAGTGTTGCAACTGTGGATGTGGTTGCTCCTTGGTAGCTCATTCTTCGGGGACATGGATGCGGTCCGTTAAACGGAAGCTTGATGAGTTTAAAATGGACGACCAATTACCCATTCCTGCGTTTGCGCGGATTGAAATTGAGAATGAATGTGTGGCCTTACGCGAGATGGTCAGCATGCAGCAGAGAACCATTCAGGATTTGAATGCTGAGTTGGACGAGGAGAGGAATTCTTCGTCCACAGCGGCCAATGAGGCCATGTCGATGATATTGAGGCTGCAGAGGGAGAAGGCGGAGGTTCAAATGGAGGCGCGCCAATTCAAGCGTTTTGCAGAGGAGAAGATGACACATGATCAGGAGGAGCTTCTGTCTTTGGAAGATTTGCTCTATAAGAGAGAACAGATAATTCAGTCACTTACCTGTGAAGTTCAGGCTTACAAACACAGGTTGATGAGCTTTGGTCTTACCGAGGACGAGGCTGAGGGTGATCAATATGAACTTCCAACCTATGAATATCCTCCTTTGAAGTGTAATGTGATGCATGATGCTATGGATGCTGATAATGATGACACTGATATAGAGAAATATGTGTTTGATGAAACCCCAAGTGACCGTTTGAGGAACTTGGAAAATAGGATTTCTAAAATGGAGAAAACCTCAACTTACAGTCAGATAGATGGGGATTTTACAGGGAAAAATGTTCTAGAGAAAGTGATCGTTGGACAGTCTCCAAGATGGACTAAGCATCCTAGGAGATCGTCCAGTGACCCAGCATCTTTGAGCGGGATGGGAAAAGAAATAGGTCCTGAGTCTATGATGGATTCTCCCAAGCTCAATAGTAACTATAGGAGAGATTATTTCTCACAGTCAGAGGATCCTTCCAATTTCAAGAAGGTAGATAATGCATCGGATGACGATGATACGAGTGACAGAATTTATACAATTGACTCTGTTCATTGTGGGGCACCATATAATGGTTTCACAGATTCCAAAGCTGGTGCTTTTGAAGATTATGCAACCACTCCTAGGGAGTCAGGGAATCATGCTGCTGATTTTGAGGATCCCTACATAAAGAAGCTTCATATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACGGATAAAGCACAGGTGGTGTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAGATGTCACCAAAAAGAAAAATGGCAAGGAAACCGTATTTTGCAGGCAACTCTAACTCTTTGCTCTTTTCAATTGTTAAGTGGATCTCATCAATTGttttctggagaaagagagctcaccaaagcaaGTATATGTTCGGGCTACCGCTTGAGAGTGTCGGCTTGCTGATGCTCCTGGACAAGGGAACGCGTGCAAGGCCATGGAGATGCATTTCAAGTACGCAAGTGTGGGATTAA 1473 0.4352 MASEVVPSSGDLLKCCNCGCGCSLVAHSSGTWMRSVKRKLDEFKMDDQLPIPAFARIEIENECVALREMVSMQQRTIQDLNAELDEERNSSSTAANEAMSMILRLQREKAEVQMEARQFKRFAEEKMTHDQEELLSLEDLLYKREQIIQSLTCEVQAYKHRLMSFGLTEDEAEGDQYELPTYEYPPLKCNVMHDAMDADNDDTDIEKYVFDETPSDRLRNLENRISKMEKTSTYSQIDGDFTGKNVLEKVIVGQSPRWTKHPRRSSSDPASLSGMGKEIGPESMMDSPKLNSNYRRDYFSQSEDPSNFKKVDNASDDDDTSDRIYTIDSVHCGAPYNGFTDSKAGAFEDYATTPRESGNHAADFEDPYIKKLHMRLQALEADRESMRQAIISMRTDKAQVVLLKEIAQHLCKEMSPKRKMARKPYFAGNSNSLLFSIVKWISSIVFWRKRAHQSKYMFGLPLESVGLLMLLDKGTRARPWRCISSTQVWD 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00800 490 Pfam Zein-binding 65 155 IPR007656 -
Gma10g00800 490 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Gma10g00800 490 Coils Coil 369 396 - -
Gma10g00800 490 PANTHER BNAANNG28530D PROTEIN 8 465 - -
Gma10g00800 490 MobiDBLite consensus disorder prediction 286 308 - -
Gma10g00800 490 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 8 465 - -
Gma10g00800 490 Coils Coil 70 115 - -
Gma10g00800 490 MobiDBLite consensus disorder prediction 253 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00800 Gma-Chr10 11446467 11449352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00800 - - gmx:100814833 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00800 10 11446467 11449352 Gma10g00800 10 11446467 11449352 ECH
Gma10g00800 10 11446467 11449352 Gma02g01527 02 30343526 30346406 GST
Gma19g01928 19 48469725 48472974 Gma10g00800 10 11446467 11449352 PCT
Gma03g01888 03 44828618 44831606 Gma10g00800 10 11446467 11449352 PCT
Gma10g00800 10 11446467 11449352 Gma19g01928 19 48469725 48472974 PCT
Gma10g00800 10 11446467 11449352 Gma03g01888 03 44828618 44831606 PCT