Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01888 ATGGATTTGGAATCTTCTGGCGATTCGGTGAAATGCTGCAAGCACTGTGGATGCGGGTGTAGTGATTGCTCCATGGCAGCTCAATCTTCAGGGAATTGGCTCCGTTCTGTGAAAAGGAAGCACAAGCAGCTGGAACAGGGCGACCAATTCTCTGTGCCGGGGCCAGATTGCGATCTGGTGGCGCGTGTTGAGATTGGGAATGAATGTGATGCACTACGCGAGGCTGTCAGCAGCCAACAGAAATCAATACAGGATTTGTATGAAGAATTGGAGGAGGAGAGGAATGCGGCCTCCTCGGCTGCGAATGAGACCATGACAATGATATTGAGGCTGCAGAGGGAGAAGGCAGAGCTTCAGCTGGAAGCACGACAGTTCAAGAGATTTGTGGAAGAGAGGACGTCGCACGATCAGCAGGAGCTTCTAGCATTGGAGGAATTGTTGTATAAGAGAGAGCAGGCAATTCACTCGCTCACATGTGAGGTGCAGGCTTATAAGCACAGGTTGATGAGTTTTGGCATCAGTGAGTCCGAGGGAGAAGGGGATCAGTATGAATTTCCCCCTTATGAGTACCCTCCTTTGAGATGTAATGCAATGCATGCTTCAACAGATGATAATGATGAGATAGACATTGACAAATATGCATTTGGCGAAACTCCTAAGGACCGTTTGAAGAACCTGGAAAGTAGGATATCTCAAATGGAGAGAAGTCCCACTTATAGTCAGATGGATGGGGAATTCAGTGGAAAAAATATTCTAGAGAAGGTGATAGTTGGACAGTCTCCAAGACGGGCTAAACATTCCAGGAAATTTTCCTGTGACTCGTCTTCATTGTGCCCTGAGTATATGATGGATTCTCCTAGCTTTAGGAAGATAGATGAGGATCTTTCCAATTTGAAGAAGGTAGATAATGCATCGGAAGCTGGTGATGATATGATTGATAAAGTCTATACAATTGACTCTGAGTTCAAAGCCGGAGCTAGCGTTTACGATTATTATGCAACCACTCCAAGGGACTTTGTTGATCATGCAGATTTTGAAGATCTACATGTAAAGAAGCTTTACATGAGGCTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACAGCTTGTTTTGTTGAAGGAAATAGCTCAAGAATTGTGCAAAGAGATGTCACAGCAGAAAAAAATGACAGCGAGATCCTTTATTAGCAGCTTTTCATTCTTTACAGTTTTTAAGtggattgcttcaattgttttctggagaaagaaagctcatcaaatcaaGTATATGTTTGGGCTACCATCTGACAGTGGGGGCTTGCTAATGCTGCTTGACAAGGGACCCCATGTAAGGTCATGGAGATATCTTCAAAGTACACAAGTGGGAGATTAG 1407 0.4321 MDLESSGDSVKCCKHCGCGCSDCSMAAQSSGNWLRSVKRKHKQLEQGDQFSVPGPDCDLVARVEIGNECDALREAVSSQQKSIQDLYEELEEERNAASSAANETMTMILRLQREKAELQLEARQFKRFVEERTSHDQQELLALEELLYKREQAIHSLTCEVQAYKHRLMSFGISESEGEGDQYEFPPYEYPPLRCNAMHASTDDNDEIDIDKYAFGETPKDRLKNLESRISQMERSPTYSQMDGEFSGKNILEKVIVGQSPRRAKHSRKFSCDSSSLCPEYMMDSPSFRKIDEDLSNLKKVDNASEAGDDMIDKVYTIDSEFKAGASVYDYYATTPRDFVDHADFEDLHVKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQELCKEMSQQKKMTARSFISSFSFFTVFKWIASIVFWRKKAHQIKYMFGLPSDSGGLLMLLDKGPHVRSWRYLQSTQVGD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01888 468 Coils Coil 350 377 - -
Gma03g01888 468 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Gma03g01888 468 PANTHER BNAANNG28530D PROTEIN 1 443 - -
Gma03g01888 468 Coils Coil 69 128 - -
Gma03g01888 468 Pfam Zein-binding 71 161 IPR007656 -
Gma03g01888 468 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01888 Gma-Chr3 44828618 44831606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01888 - - gmx:100802555 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01888 03 44828618 44831606 Gma03g01888 03 44828618 44831606 ECH
Gma19g01928 19 48469725 48472974 Gma03g01888 03 44828618 44831606 GST
Gma03g01888 03 44828618 44831606 Gma10g00800 10 11446467 11449352 PCT
Gma03g01888 03 44828618 44831606 Gma02g01527 02 30343526 30346406 PCT
Gma10g00800 10 11446467 11449352 Gma03g01888 03 44828618 44831606 PCT
Gma02g01527 02 30343526 30346406 Gma03g01888 03 44828618 44831606 PCT