Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00494 ATGGAGACACACGCTGAGATAAGGGTGTCAAAGTTCAAGAGGGTTTGTGTCTTCTGTGGTAGTAGCCCTGGCAAAAAGAGAAGCTACCAAGATGCTGCCATTGAACTTGGCAATGAATTGGTCTCAAGGAACATTGATCTGGTCTATGGAGGAGGAAGCATTGGTTTGATGGGTTTGGTTTCCCAAGCTGTTCATGATGGTGGTAGGCATGTCATAGGAGTTATTCCCAAGACACTCATGCCTCGAGAGCTAACTGGTGAAACAGTGGGAGAAGTAAAAGCTGTAGCTGATATGCACCAAAGGAAGGCAGAGATGGCTAAGCATTCAGATGCCTTTATTGCCTTACCAGGTGGTTATGGGACTCTAGAGGAGCTTCTTGAAGTCATAACCTGGGCTCAACTTGGGATCCATGACAAACCGGTGGGATTGGTAAATGTTGATGGATACTTCAATTCATTGCTATCATTTATTGACAAAGCTGTAGAGGAGGGATTTATTAGTCCTAATGCCCGCCACATTATTGTGTCAGCACCAACATCAAAAGAGTTAGTAAAGAAATTGGAGGATTACGTTCCGTGTCATGAAAGTGTTGCTTCTAAGTTGAGCTGGCAGATAGAACAACAACTCACTTACCCTGAAGAGTATGACATCTCGAGGTAG 660 0.4424 METHAEIRVSKFKRVCVFCGSSPGKKRSYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTSKELVKKLEDYVPCHESVASKLSWQIEQQLTYPEEYDISR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00494 219 PANTHER LOG FAMILY PROTEIN YJL055W 1 219 - -
Gma10g00494 219 Gene3D - 3 189 - -
Gma10g00494 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Gma10g00494 219 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Gma10g00494 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Gma10g00494 219 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00494 Gma-Chr10 4922916 4927938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00494 K22522 - gmx:100791145 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00494 10 4922916 4927938 Gma09g02100 09 46592003 46593920 ECH
Gma10g00494 10 4922916 4927938 Gma10g00494 10 4922916 4927938 ECH