Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02100 ATGGAAGAAGTAAAGGTGTCACCAGAAAATAAGCACAAAGGAAGGTTCCAACGAATATGTGTATTCTGTGGTAGCAGGGTTGGATATAAGTCTTCATTTAGTGATGCAGCTCTTGAGCTTGGTAAATTGTTGGTTGAAAGGAAGATTGATTTGGTTTATGGAGGAGGAAGATTAGGACTAATGGGTTTGATCTCTCAAACTGTGCTAAAGGGAGGTCGCCATGTTCTTGGTGTGATTCCTAAAGCTCTGCTGCCTCTTGAGATATCTGGGGAAACTTTTGGAGAAGTGAAAACAGTTGCAAATATGCATGAAAGGAAATCAGTAATGGCTAAACATGCTGATGCGTTCATAGCCCTTCCTGGAGGCTATGGAACCATGGAAGAGTTGCTGGAGGTGATAGCATGGTCCCAACTAGGAATACATGATAAACCAGTGGGTTTGTTGAATGTAGATGGGTATTTCCACAGCTTGCTGTCCTTATTTGACAAGGGAGTGGAAGAGGGTTTTATAGACAACTCTGCAAGGCATATTGTAGTCATAGCAGACACAGCAGAAGAACTCATAAAGAGAATGGAGGAATATGTCCCCAACCATCACAAGGTTGCAACAAGACAAAGTTGGGCAAGGGACCAATTATTATTTGAGCCTACTGAAACTGGGGAGATCCTATGA 672 0.4241 MEEVKVSPENKHKGRFQRICVFCGSRVGYKSSFSDAALELGKLLVERKIDLVYGGGRLGLMGLISQTVLKGGRHVLGVIPKALLPLEISGETFGEVKTVANMHERKSVMAKHADAFIALPGGYGTMEELLEVIAWSQLGIHDKPVGLLNVDGYFHSLLSLFDKGVEEGFIDNSARHIVVIADTAEELIKRMEEYVPNHHKVATRQSWARDQLLFEPTETGEIL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02100 223 Pfam Possible lysine decarboxylase 61 191 IPR031100 -
Gma09g02100 223 Gene3D - 16 210 - -
Gma09g02100 223 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4-RELATED 9 213 - -
Gma09g02100 223 TIGRFAM TIGR00730: TIGR00730 family protein 18 194 IPR005269 GO:0009691|GO:0016787
Gma09g02100 223 PANTHER LOG FAMILY PROTEIN YJL055W 9 213 - -
Gma09g02100 223 SUPERFAMILY MCP/YpsA-like 16 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02100 Gma-Chr9 46592003 46593920 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02100 K22522 - gmx:100811032 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01670 03 42788224 42792393 Gma09g02100 09 46592003 46593920 ECH
Gma19g01718 19 46482871 46487049 Gma09g02100 09 46592003 46593920 ECH
Gma10g00494 10 4922916 4927938 Gma09g02100 09 46592003 46593920 ECH
Gma09g02100 09 46592003 46593920 Gma09g02100 09 46592003 46593920 ECH