Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00309 ATGAGCAAAATCCGTCTCTGCCAGAGGATTCTCCTCCTCTCTCTCTTCTTTCTCTCCGTCGTCGCTCCTCTCGTCTTCGTCTCTCACCGCCTCAACCTTCTCACTCTTCTCGGGAGAAGAGAGTTTCTCGAAGATTTATATCGCGCTACATACAGGGGAGATACTTTGAAGTTAAATGCTGTAGAACAGGAAGGTGCTGACGGATTAGAAGAGCCAAATCAAGTTGTTTATACGGAAAAGGATTTTGCTTCAACAATTAGTTACTATTCAGAAAAGAATAATGATTTTAAGGAATCTGGAATTGCAGGTTACAGAACTACCACTTTGGAAAGAAATGGATTCAACCCAGATAAAGGACAACGCCAGGGAGCTCAGCAGAATGAATTATCCTTCATGGCTCAAGGTAGGAACATACATGATTCACAGAGAATGTCAGAGAAGAATATTCAAGTTACAAATAAGAAGGTTCAAGAGATTAAGGATCAAGTTATTTTAGCCAAAGCATACTTGAAAATTGCACCACCAAGCAGCAATTTACGCTTGAGGGATTTGGAGCAGCTAACGAGAGAGATGGAATTAGCAGTTGGAGAAGCCACCCAGGATTCGGATCTGTCAACGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCCCTGTCTAAAGTCTATCGTGCTTTCCCAGACTGCTCTGCTGTGGGTGCTAAGCTTCATAAAATGCTGCGTCAGGCTGAAGAGCAAGTCCGTTCTCAGAGACATCAAGCAACATATCTTGTTCATCTTGCTGCAAGGACTGCCCCAAAAGGCCTACACTGTCTTTCTATGCGGTTGACTGCAGAATACTTTGCCTTGAGGCCTGAGGAGAGAAAGCTTCCAAATGAAAATAAAATTTATCACCCTGACCTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGCGGTTGTTAATTCTACTATCTCTACTGCCAAGGAACAGGAGAAACTTGTTTTCCATGTATTGACCAAATCACTCAACTTACCAGCAATCTCAATGTGGTTCTTAATAAATCCTCCTGCCAAAGCTACAGTCCACATACTGAGCATAGACAACTTTGAATGGTCGTCCAAGTACAATACCTACCAGGAAAATAATTCCAGCTATCCAAGATTCACTTCTGAACTGAACTACCTGCATTTCTACCTTCCAGACATTTTTCCTGCTTTAAATAAGATTGTACTTTTGGATCATGATGTGGTGGTGCAACAAGATCTCAGTGAACTATGGAATATCAATATGAAGGGAAACGTAATTGGAGCAGTTGGAACTTGTCAGGAAGGAAAAATCCCATTTTATAGGATTGATATGTTCATAAACTTGTCAGATCCATTAATTGGAAAGCGGTTTGATGCCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTGCAACAGTGGAGGAGACATAATTTAACTGCTGTCTATCAGAATTATGTGCAAATGGGTTTGTGGAACATTGGAAGTCTACCTTTAGGCTGGCTGACTTTCTATAATAAGACAGAGTTGTTGGATAGACAGTGGCATGTTCTTGGCCTTGGCTATAGTTCGGATGTTGATCGAAATGAGATTGAGCAGGCTTCCGTTATACACTATGATGGGCTTAGGAAGCCGTGGCTGGATATTGCAATGGGAAGATATAAAAGTTATTGGACCAAATTCTTGAATTTTGACAACATTTTTTTGCAACAGTGCAATCTCCAGGCATAG 1758 0.4141 MSKIRLCQRILLLSLFFLSVVAPLVFVSHRLNLLTLLGRREFLEDLYRATYRGDTLKLNAVEQEGADGLEEPNQVVYTEKDFASTISYYSEKNNDFKESGIAGYRTTTLERNGFNPDKGQRQGAQQNELSFMAQGRNIHDSQRMSEKNIQVTNKKVQEIKDQVILAKAYLKIAPPSSNLRLRDLEQLTREMELAVGEATQDSDLSTSALQKMRHMEASLSKVYRAFPDCSAVGAKLHKMLRQAEEQVRSQRHQATYLVHLAARTAPKGLHCLSMRLTAEYFALRPEERKLPNENKIYHPDLYHYAVFSDNVLACAAVVNSTISTAKEQEKLVFHVLTKSLNLPAISMWFLINPPAKATVHILSIDNFEWSSKYNTYQENNSSYPRFTSELNYLHFYLPDIFPALNKIVLLDHDVVVQQDLSELWNINMKGNVIGAVGTCQEGKIPFYRIDMFINLSDPLIGKRFDANACTWAFGMNLFDLQQWRRHNLTAVYQNYVQMGLWNIGSLPLGWLTFYNKTELLDRQWHVLGLGYSSDVDRNEIEQASVIHYDGLRKPWLDIAMGRYKSYWTKFLNFDNIFLQQCNLQA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00309 585 Pfam Glycosyl transferase family 8 271 559 IPR002495 GO:0016757
Gma10g00309 585 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 584 IPR029993 GO:0047262
Gma10g00309 585 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 304 577 IPR029044 -
Gma10g00309 585 PANTHER HEXOSYLTRANSFERASE 1 584 - -
Gma10g00309 585 SUPERFAMILY Nucleotide-diphospho-sugar transferases 302 582 IPR029044 -
Gma10g00309 585 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00309 Gma-Chr10 2854345 2858433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00309 1 585 Glycosyltransferase AT1G06780 47.798 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00309 K13648 - gmx:100819088 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00309 10 2854345 2858433 Gma10g00309 10 2854345 2858433 ECH
Gma10g00309 10 2854345 2858433 Gma02g01292 02 15009497 15014704 GST
Gma19g01525 19 44595364 44602202 Gma10g00309 10 2854345 2858433 PCT
Gma03g01465 03 40885058 40890883 Gma10g00309 10 2854345 2858433 PCT
Gma10g00309 10 2854345 2858433 Gma19g01525 19 44595364 44602202 PCT
Gma10g00309 10 2854345 2858433 Gma03g01465 03 40885058 40890883 PCT