Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01465 ATGAAGCAGTCACGTCGCCGGCAGAGGACTCTGCTCCTCGCTCTGCTCTTTCTCTCCGTCGTTTCTCCGCTCGTTTTCGTCTCTCACCACCTCAACACCATCACTCCCGACGGACGACGAGATTTTCTTGATGAGTTATCGAGTTTTACGCATAGGACAGACCCTTTAAATGCAATTGAACAGGAAGGTGCTGAAGAATTAGAAGAGCCAAAAGAAATTGTTTATAAAGAAGAGGATTTTGTTTCAACAAATAGTTACATTTTGCAAAAGACTAATGATACTGAGGGATCTAAAAGTGAGGGGTACAGAAATAACACTTTGGAAAGAAATGTTTCAGAATTCGACCAGCACAAAAGACAAAACCAGGAAGCTCAACAAAAAGGATTACTCTCCACGGATGGGGATGTGAATATATTCAATACAACAGTCACACATAATCAGAATATACACACTCATTTTCAAAGAGTGACAGATGAGAATGTTGAAGTGACAGGAAACCAATCTGTTCCAAAAGCAACCCAACATCGTCAGAGTTCATGCCCTCAGTCTCAGAGAGTGACAAATCAGAAGGTTTTGGAGATTAAGGATCAAATTATTAGAGCCAGAGCATACTTGGGGTTTGCTACACCAAGCAGCAACTCACACTTGGTGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAACGTGCTGTTGGAGAAGCTACTAAGGATTCAGAGCTGTCAAGGAGTGCTTTGCAGAAAACAAGACACATGGAAGCTTCACTGTCTAAAGCCAACTGTGTTTTCCCAGACTGCACTGCTATGGCAGCTAAGCTCCGTGCAATGAATCATAATGCTGAAGAGCAAGTTCATTCTCATCAACGTGAAGCAACACATCTTGTTCATCTTGCTGCAAGGACCACCCCAAAAGGTCTTCACTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCCTGAAACCTGAGGACCGGAAGCTTCCAAATGAAAATAAGATTCATGATCCAAAACTTTATCATTATGCTGTCTTCTCTGACAATCTTCTAGCATGTGCTGTGGTTGTTAACTCCACTGTCTCTAATGCCAAGAAACAGGAGAAACTTGTTTTCCATGTAGTAACCAATTCACTCAACTTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGCAAAGCCACAGTCCACATACAAAGCATTGAGAACTTTGAATGGTTGCCCAAGTACAATACATTCAACAAACATAATTCCAGTGATCCAAGATATACTTCTGAGTTGAACTACCTGCGTTTCTACTTGCCAGATATCTTCCCTACTCTAAATAAGATTCTGTTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGTGGACTATGGAATGCCAATATGAAAGGAAAAGTAATTGCAGCAGTGGGCACTTGTCAGGAAGGTGGAACCTCATTTCATAGGATGGATATGTTCATAAACTTCTCAGATCCATTCATTGCAAAGAGGTTTGATGTCAATGCTTGTACATGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGGAGACATAATTTAACTGCTCTCTACCACAGATATTTGCAAATGGGTTCCAAGAGACCATTGTGGAACATTGGAAGTCTGCCTTTAGGCTGGCTCACTTTCTATAACAAGACTAAGGTTTTGGACAGACGGTGGCACATTCTTGGCCTTGGTTATGACTCAGTTGTCGATAAAAACGAGATTGAGCGAGCTGCCATTATACACTACGATGGAATTAGGAAACCGTGGTTGGACATTGCAATGGGAAGATACCGAAGTTACTGGACCAAATATTTGAACTTTGACCTCCCTATTTTGCAACGTTGCAATCTCCAGGCGTAG 1878 0.418 MKQSRRRQRTLLLALLFLSVVSPLVFVSHHLNTITPDGRRDFLDELSSFTHRTDPLNAIEQEGAEELEEPKEIVYKEEDFVSTNSYILQKTNDTEGSKSEGYRNNTLERNVSEFDQHKRQNQEAQQKGLLSTDGDVNIFNTTVTHNQNIHTHFQRVTDENVEVTGNQSVPKATQHRQSSCPQSQRVTNQKVLEIKDQIIRARAYLGFATPSSNSHLVKELKLRIKEMERAVGEATKDSELSRSALQKTRHMEASLSKANCVFPDCTAMAAKLRAMNHNAEEQVHSHQREATHLVHLAARTTPKGLHCLSMQLTADYFALKPEDRKLPNENKIHDPKLYHYAVFSDNLLACAVVVNSTVSNAKKQEKLVFHVVTNSLNFPAIWMWFLLNPPGKATVHIQSIENFEWLPKYNTFNKHNSSDPRYTSELNYLRFYLPDIFPTLNKILFFDHDVVVQQDLSGLWNANMKGKVIAAVGTCQEGGTSFHRMDMFINFSDPFIAKRFDVNACTWAFGMNLFDLQQWRRHNLTALYHRYLQMGSKRPLWNIGSLPLGWLTFYNKTKVLDRRWHILGLGYDSVVDKNEIERAAIIHYDGIRKPWLDIAMGRYRSYWTKYLNFDLPILQRCNLQA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01465 625 MobiDBLite consensus disorder prediction 111 131 - -
Gma03g01465 625 Pfam Glycosyl transferase family 8 307 599 IPR002495 GO:0016757
Gma03g01465 625 PANTHER HEXOSYLTRANSFERASE 1 624 - -
Gma03g01465 625 SUPERFAMILY Nucleotide-diphospho-sugar transferases 338 622 IPR029044 -
Gma03g01465 625 MobiDBLite consensus disorder prediction 166 186 - -
Gma03g01465 625 Coils Coil 269 289 - -
Gma03g01465 625 Coils Coil 217 237 - -
Gma03g01465 625 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 340 614 IPR029044 -
Gma03g01465 625 Coils Coil 107 127 - -
Gma03g01465 625 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 624 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01465 Gma-Chr3 40885058 40890883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01465 1 625 Glycosyltransferase AT1G06780 49.221 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01465 K13648 - gmx:100811619 1243.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01525 19 44595364 44602202 Gma03g01465 03 40885058 40890883 GST
Gma03g01465 03 40885058 40890883 Gma10g00309 10 2854345 2858433 PCT
Gma03g01465 03 40885058 40890883 Gma02g01292 02 15009497 15014704 PCT
Gma10g00309 10 2854345 2858433 Gma03g01465 03 40885058 40890883 PCT
Gma02g01292 02 15009497 15014704 Gma03g01465 03 40885058 40890883 PCT