Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00274 ATGAGAGATGACAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCAAGAAGTGGTTCAACATTAAAAGCAAAAACGAGGACTTTCAGGCAGATGATGTCCTCTACGCAGgtgtcaatcaagagtggaggaactgctcacagagggaggaagacactATCAAGAGAAGCAAAACAGAGAGAGCAAAGAGGAGACACTCAGATAGAATGCGGCGAGGTAGAATTGACCGTGATGCAGCTCCGGTTACAGATGTGCATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCTGGAAAATCTCCTCCAAGTTATTTGAGTCTGGAAGATTGGCTTCACTCTTCTCCTCCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCTGGCAATGTTTTGGGCACAGAAGATAATGGCCCTGCCAGAAAGTGGCTATCTCTTATTAGGAAGACCCTAAACAGTCTTCCTGGAACAAGCGGTGAATGCCACACTACTTCACCGCTCCCTGACCCTATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGACGACCTCTTTCTTCCATCGCCGGTCATTCCAATCCTTGAGTCATAGTATGAGAATGGACAATGACATGTCACTACCACAAGCATGCCTTGATCGTCGTCTCAGCGTATGTGATAGAATGATGTTTGGTCACAGGCCAAGTGACTATGACCCCTGTTATAGATGGGCTTCCTCGGATGATGAAAATGGCCCTGGTGACTCCCCAGTTGTAACACATTATTCACCAATGACATATAGAGGTTGCTTCTCTATGGAGGATAGATTTAGACAGACAGGACAGTCAAGATACTGTTTGGTTGCTAGTAAGCAAATGGTTGGAATATTTCTAACAGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAATATGAAAGTGTCTTGTGTTGGCAGAGGATTAATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAGGAAGGTGATGAACTAAGGAGGAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGAGTTCAAGACATGGGAGATGAGAGTTCTCCTCAGACAATTCTGGATCATGATCGAATAATTTGGCTGGGGGATTTAAATTACCGGATAGCCCTTTCTTACCGTGCAGCAAAGGCTCTTGTTGAGATGCATAATTGGAAGGTTCTCTTCTTCTTTCAGCTACATATAGAGCGGAGACAAGGTCGAGTCTTTGAAGGATGGAATGAGGGGAAAATATATTTCCCTCCCACATACAAGTATTCAAACAATTCAGATAGATATGCAGGCGATGAAAGACAGTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCCTCCGCCAATTATCGTACGTTCGTGGGGAGTCAAGATTCTCAGATCATAGACCAGTTTATAGCATGTTTCTGGCAGAAGTTGAGTCTCAAAGTGTACGATACAAGGTGGGCAATGCTCTGGGGAATTCTAGCCCCAATGGTGATGTAAACATTCTGTTACTCTCACACTCCCAATTAAGCTGCAGGGTTTGA 1668 0.4191 MRDDNSKKSKLSWPKTLVKKWFNIKSKNEDFQADDVLYAGVNQEWRNCSQREEDTIKRSKTERAKRRHSDRMRRGRIDRDAAPVTDVHNYRIFAATWNVAGKSPPSYLSLEDWLHSSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLSLIRKTLNSLPGTSGECHTTSPLPDPIVELDADFEGSMRQKTTSFFHRRSFQSLSHSMRMDNDMSLPQACLDRRLSVCDRMMFGHRPSDYDPCYRWASSDDENGPGDSPVVTHYSPMTYRGCFSMEDRFRQTGQSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVQDMGDESSPQTILDHDRIIWLGDLNYRIALSYRAAKALVEMHNWKVLFFFQLHIERRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERQSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSMFLAEVESQSVRYKVGNALGNSSPNGDVNILLLSHSQLSCRV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00274 555 Gene3D Endonuclease/exonuclease/phosphatase 69 195 IPR036691 -
Gma10g00274 555 Gene3D Endonuclease/exonuclease/phosphatase 261 536 IPR036691 -
Gma10g00274 555 MobiDBLite consensus disorder prediction 49 73 - -
Gma10g00274 555 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 525 IPR045849 GO:0004445|GO:0046855
Gma10g00274 555 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 525 - -
Gma10g00274 555 SUPERFAMILY DNase I-like 75 519 IPR036691 -
Gma10g00274 555 Pfam Endonuclease/Exonuclease/phosphatase family 95 508 IPR005135 GO:0003824
Gma10g00274 555 SMART i5p_5 224 523 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00274 Gma-Chr10 2499397 2503484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00274 291 488 Acyl Lipid Metabolism Gene Families AT1G05630 29.148 1.30e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00274 - - gmx:100797409 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00274 10 2499397 2503484 Gma10g00274 10 2499397 2503484 ECH
Gma10g00274 10 2499397 2503484 Gma02g01326 02 15405722 15409387 GST
Gma19g01496 19 44297007 44300587 Gma10g00274 10 2499397 2503484 PCT
Gma03g01439 03 40587677 40591588 Gma10g00274 10 2499397 2503484 PCT
Gma10g00274 10 2499397 2503484 Gma19g01496 19 44297007 44300587 PCT
Gma10g00274 10 2499397 2503484 Gma03g01439 03 40587677 40591588 PCT