Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01439 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGCCAAAATCATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCACGCAGATGATGTTCTCTCCCAAGGTGTTGATGAAGAGTGTAGCAGCAACTACTCAGAAAGGGAGGCATGCACCATCAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCGGACAGAATGCGAAGAGGTAAGAATGACCTTGATGAAGCTCAGGTTACAGATGTGTATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAACCTTGAAGATTGGCTTCACACATCTCCACCCGCTGATATCTATGTTCTTGGATTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGGACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGAAGGACCCTGAACAGCCTTCCTGGAACAAGTGGCGGATGCCACACTCCTTCACCCCTCCCTAATCCTATTGTAGAGCTAGATGCTGATTTTGAAGGATCAATGAGGCAGAAGGCAACTTCTTTCTTTCAACGAAGATCCTTCCAATCCTTGAGCCGTAGTATGAGAATCGATAATGATATGATAAAGCCCCAAGCTTGCCTTGAGCGCCGTCTCAGTGTCTGTGATAGAGTGATGTTTGGTCACAGAACGAGCGACTACGACCCCAATTATCGGTGGGGTTCCTCAGACGAAGAAAACGGCACTGGTGGCTCTCCAATTACAACACAATATTCACCAATGTCATATGGCGGTTGTTTCACTACGGAGGACAGTGATAGACAGACAGGACACTCTAGATACAGCTTGGTTGCTAGCAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAGAGTGATATAAGAGATGATGTCCACAACATGAAAGTGTCTTGTGTTGGCAGAGGGTTGATGGGCTATCTTGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACATCTGGACAAAAGGATGGTGATGAGTTACGGAGAAATTCAGATGTAATGGAAATTCTCAGAAAGACAAGGTTTCCCCCGGTCCATGACATCGGTGATGAGTATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAGAATGATCAGGCATGTTACTTCTTTTTGTGTATAGAGCAGAGGCAAGGTCGAGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTTCCTCCGACTTATAAGTATTCAAACAATTCAGACAGATATGCAGGTGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGGGGCCTTCACCAATTATCATATGTTCGTGGGGAGTCAAGGTTTTCTGATCATCGGCCAGTGTATAGCATGTTCTTGGCAGAGGGAACTGAAACAGCTCAGTGTACCACACAAGCTGCAGAGTTAACTATGGATATTTGCGGCTTACAACCTTATTGGTAG 1653 0.4338 MRDENSKKSKLSWPKSLVKKWFNIKSKAEDFHADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRMRRGKNDLDEAQVTDVYNYRIFAATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNSLPGTSGGCHTPSPLPNPIVELDADFEGSMRQKATSFFQRRSFQSLSRSMRIDNDMIKPQACLERRLSVCDRVMFGHRTSDYDPNYRWGSSDEENGTGGSPITTQYSPMSYGGCFTTEDSDRQTGHSRYSLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPVHDIGDEYSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQACYFFLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSMFLAEGTETAQCTTQAAELTMDICGLQPYW 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01439 550 Pfam Endonuclease/Exonuclease/phosphatase family 96 515 IPR005135 GO:0003824
Gma03g01439 550 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 531 IPR045849 GO:0004445|GO:0046855
Gma03g01439 550 Gene3D Endonuclease/exonuclease/phosphatase 67 543 IPR036691 -
Gma03g01439 550 SUPERFAMILY DNase I-like 81 525 IPR036691 -
Gma03g01439 550 SMART i5p_5 193 530 IPR000300 GO:0016791|GO:0046856
Gma03g01439 550 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01439 Gma-Chr3 40587677 40591588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01439 124 495 Acyl Lipid Metabolism Gene Families AT2G43900 26.617 9.67e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01439 - - gmx:100803074 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01439 03 40587677 40591588 Gma03g01439 03 40587677 40591588 ECH
Gma19g01496 19 44297007 44300587 Gma03g01439 03 40587677 40591588 GST
Gma03g01439 03 40587677 40591588 Gma10g00274 10 2499397 2503484 PCT
Gma03g01439 03 40587677 40591588 Gma02g01326 02 15405722 15409387 PCT
Gma10g00274 10 2499397 2503484 Gma03g01439 03 40587677 40591588 PCT
Gma02g01326 02 15405722 15409387 Gma03g01439 03 40587677 40591588 PCT