Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00238 ATGGGTGCTTCACAATCAATCTCAGAAAATTCCATCCATGAATTCACAGTCAAGGATGCCAGAGGCAAAGATGTGAACCTGAATGCCTACAGGGGGAAAGTTCTTCTTGTGATCAATGTCGCTTCAAAATGTGGATTTGCGGATGCCAATTACAGCCAGTTAACTCAGATTTACTCCACATACAAGAGCAGGGGACTTGAGATATTGGCATTTCCATGCAACCAATTTTTGAAGAAAGAGCCAGGGACTAGCCAGGAGGCACAAGAATTTGCATGTACAAGATATAAGGCTGAGTATCCCATTTTTGGGAAGATACGTGTGAATGGATCAGATACTGCACCAGTCTTCAAATTCCTGAAAACGCAGAAATCTGGAGTTATGGGGTCAAGAATCAAATGGAATTTCACAAAGTTTTTAGTCGATGAGGAAGGCCGTGTCATCCAGCGTTATAGTCCAACCACCAAGCCATTAGCCATTGAAAGTGACATCAAGAAGGCATTGCAGGTGGCTTGA 513 0.4308 MGASQSISENSIHEFTVKDARGKDVNLNAYRGKVLLVINVASKCGFADANYSQLTQIYSTYKSRGLEILAFPCNQFLKKEPGTSQEAQEFACTRYKAEYPIFGKIRVNGSDTAPVFKFLKTQKSGVMGSRIKWNFTKFLVDEEGRVIQRYSPTTKPLAIESDIKKALQVA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00238 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Gma10g00238 170 PANTHER GLUTATHIONE PEROXIDASE 1 170 IPR000889 GO:0004602|GO:0006979
Gma10g00238 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Gma10g00238 170 PANTHER GLUTATHIONE PEROXIDASE 1 170 - -
Gma10g00238 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Gma10g00238 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Gma10g00238 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Gma10g00238 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Gma10g00238 170 Gene3D Glutaredoxin 3 169 - -
Gma10g00238 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Gma10g00238 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Gma10g00238 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Gma10g00238 170 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00238 Gma-Chr10 2201203 2204291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00238 - K00432 gmx:102659700 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00238 10 2201203 2204291 Gma10g00238 10 2201203 2204291 ECH
Gma10g00238 10 2201203 2204291 Gma02g01358 02 15719910 15725227 GST
Gma19g01459 19 43803578 43808782 Gma10g00238 10 2201203 2204291 PCT
Gma03g01396 03 40073882 40077857 Gma10g00238 10 2201203 2204291 PCT
Gma10g00238 10 2201203 2204291 Gma19g01459 19 43803578 43808782 PCT
Gma10g00238 10 2201203 2204291 Gma03g01396 03 40073882 40077857 PCT