Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01396 ATGGGTGCTTCGCTATCGGTCTCGGAAAAATCCATCCATGAATTCATGGTCAAGGATGCTAAGGGCAGAGACGTGAACCTCAGCATCTACAAAGGGAAGGTTCTTCTTGTAGTAAATGTCGCTTCAAAATGTGGATTTACGAATACCAATTACACCCAGTTAACTGAGCTTTACAGCAAATACAAAGACAGAGGCCTTGAGATACTGGCATTTCCATGCAACCAGTTTCTGAAGCAGGAGCCTGGGAGTAGCCAGGACGTAGAGGAATTTGCCTGCACAAGATACAAGGCCGCGTATCCCATTTTTGGAAAGGTTGTACGTGTCAATGGACCTGATACAGCACCTGTCTACAAATTCCTTAAAGCAAATAAATCAGGATTTCTGGGTTCTAGGATAAAGTGGAATTTCACCAAGTTTTTGGTTGACAAGGAAGGGAATGTCCTCCGGCGTTATGGTTCAACCACCTCACCGTTTTCCATTGAAAATGACATCAAGAGAGCATTGGGGGAGGCTTGA 516 0.4457 MGASLSVSEKSIHEFMVKDAKGRDVNLSIYKGKVLLVVNVASKCGFTNTNYTQLTELYSKYKDRGLEILAFPCNQFLKQEPGSSQDVEEFACTRYKAAYPIFGKVVRVNGPDTAPVYKFLKANKSGFLGSRIKWNFTKFLVDKEGNVLRRYGSTTSPFSIENDIKRALGEA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01396 171 Pfam Glutathione peroxidase 12 121 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 PANTHER GLUTATHIONE PEROXIDASE 1 170 - -
Gma03g01396 171 CDD GSH_Peroxidase 11 164 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Gma03g01396 171 ProSiteProfiles Glutathione peroxidase profile. 2 171 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Gma03g01396 171 Gene3D Glutaredoxin 4 170 - -
Gma03g01396 171 ProSiteProfiles Thioredoxin domain profile. 6 169 IPR013766 -
Gma03g01396 171 PIRSF Glutathion_perox 2 171 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 PANTHER GLUTATHIONE PEROXIDASE 1 170 IPR000889 GO:0004602|GO:0006979
Gma03g01396 171 SUPERFAMILY Thioredoxin-like 11 169 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01396 Gma-Chr3 40073882 40077857 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01396 - K00432 gmx:113001172 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01396 03 40073882 40077857 Gma03g01396 03 40073882 40077857 ECH
Gma19g01459 19 43803578 43808782 Gma03g01396 03 40073882 40077857 GST
Gma03g01396 03 40073882 40077857 Gma10g00238 10 2201203 2204291 PCT
Gma03g01396 03 40073882 40077857 Gma02g01358 02 15719910 15725227 PCT
Gma10g00238 10 2201203 2204291 Gma03g01396 03 40073882 40077857 PCT
Gma02g01358 02 15719910 15725227 Gma03g01396 03 40073882 40077857 PCT