Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00222 ATGGCCAAGTGCAGGAGTTCTACTTCTCCCTATGCATTGTTTGTGTTCTTCTTCTGCTTTCTACAAGTCCAGGCGATTCTGGACCCTGCCGATTTCCTCGCTCTGCAAAACATTCGTAAGGCTCTGGAAGACATGCCAGGTTCCGATTTCTTTTCCACTTGGGATTTCACCGCAGACCCATGCAACTTCGCCGGCGTTTACTGCGACTCCGACAAGATCATTGCGCTCAACCTCGGCGACCCCCGGGCGGGCTCTCCCGGCCTCACCGGCCGCCTCGACCCCGCCGTCGGCAAGCTCTCCGCGCTCGCCGAGTTCACCGTCGTCCCTGGCCGAATATACGGTCCTCTCCCCGAAACGCTCTCCGATTTGAAGAACCTCAGGTTCCTCGGCGTCAACCGCAACTTCATCTCCGGCCAAATTCCGACCAAATTAGGTGATCTCCGCAACCTCCGAACTATCGATCTCAGCTACAACCAGCTCAGCGGACGCATTCCTCCAACGGTAGGAACCTTACCGGAGCTAACAAACCTAATCCTCTGCCATAACCGTCTCTCCGGTTCGGTCCCCCGGTTCGAGTCGCACACACTAACCCGGCTCGATCTGAAGCACAACGGTCTCTCCGGTTCGCTTCCTCCTGATTGCCTCCCTCCTTCCCTCCAGTACCTCTCTCTTTCCTGGAACCAGCTCACCGGCCCAATGGACCGCCACCTGGCCCGTCTCGACCAGCTCAACTATTTGGACCTAAGCCTGAACCAATTCACGGGCCCAATCCCGGGCCGAATATTTTCTTTCCCACTGACAAATCTTCAGTTAGAGAGGAACCAGTTCTCGGGCATGGTTCAGCCCGTGGACCAGGTTTCGATCCCGACCGTTGATCTGAGTTACAACCGGCTGTACGGTCAGATATCGCCGATGCTGGCGACAGTGCAGAATCTTTACCTGAACAACAACCGGTTCACGGGTCGGGTACCGGCTAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATTCAGATACTTTACTTGCAGCATAACTATCTGACGGGGATTGAGATAAGCCCTACGGCGGTGATTCCCGAGAGAAGCTCGCTGTGTCTGCAGTATAACTGCATGGTCCCGCCCGTAGAGACTCCCTGCCCACTTAGGGCTGGTAAGGAGAAAACCAGGCCCACTGCGCAGTGCAATCAGTTGAAGGATTTGAAGGACTAA 1206 0.5597 MAKCRSSTSPYALFVFFFCFLQVQAILDPADFLALQNIRKALEDMPGSDFFSTWDFTADPCNFAGVYCDSDKIIALNLGDPRAGSPGLTGRLDPAVGKLSALAEFTVVPGRIYGPLPETLSDLKNLRFLGVNRNFISGQIPTKLGDLRNLRTIDLSYNQLSGRIPPTVGTLPELTNLILCHNRLSGSVPRFESHTLTRLDLKHNGLSGSLPPDCLPPSLQYLSLSWNQLTGPMDRHLARLDQLNYLDLSLNQFTGPIPGRIFSFPLTNLQLERNQFSGMVQPVDQVSIPTVDLSYNRLYGQISPMLATVQNLYLNNNRFTGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKEKTRPTAQCNQLKDLKD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00222 401 Pfam Leucine Rich repeat 217 231 IPR001611 GO:0005515
Gma10g00222 401 Pfam Leucine Rich repeat 193 208 IPR001611 GO:0005515
Gma10g00222 401 Pfam Leucine Rich Repeat 149 168 IPR001611 GO:0005515
Gma10g00222 401 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Gma10g00222 401 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Gma10g00222 401 SUPERFAMILY L domain-like 52 371 - -
Gma10g00222 401 PANTHER LRR RECEPTOR-LIKE KINASE 15 395 - -
Gma10g00222 401 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 15 395 - -
Gma10g00222 401 Gene3D Ribonuclease Inhibitor 194 371 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00222 Gma-Chr10 2046541 2047955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00222 34 327 Receptor kinase-like Gene Family AT5G62230 31.833 7.36e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00222 - - gmx:100800224 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00222 10 2046541 2047955 Gma10g00222 10 2046541 2047955 ECH
Gma10g00222 10 2046541 2047955 Gma02g01375 02 15920559 15921758 GST
Gma19g01433 19 43604934 43606566 Gma10g00222 10 2046541 2047955 PCT
Gma03g01367 03 39855794 39856972 Gma10g00222 10 2046541 2047955 PCT
Gma10g00222 10 2046541 2047955 Gma19g01433 19 43604934 43606566 PCT
Gma10g00222 10 2046541 2047955 Gma03g01367 03 39855794 39856972 PCT