Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01375 ATGACCAGTTCTTCTTCTTCTTCCTATGCACTGCTTCTCTTTTTCTTCTGCTTTCTCCAACTGGAGGCTATTTTGGACCCTGCTGATTTCCTCGCTCTGCAAAACATTCGTAAAGCTCTGCAAGACATGCCTGCTTCCGATTTCTTCTCTTCCTGGGATTTCACCGCAGACCCATGCAACTTCGCCGGCGTTTACTGCGACTCCGACAAGGTCATCGCGCTCAACCTCGGCGACCCCAGGGCTGGCTCTCCCGGCCTCACCGGCCGCCTCCACCCCTCCGTCGGCAAGCTCTCCGCGCTCGCCGAGTTCACCGTCGTCCCTGGCCGTATTTACGGTCCCCTCCCCGAAACACTCTCCGATTTGAAGAACCTCAGGTTTCTCGGCGTCAACCGCAACTTCATCTCCGGCGAAATTCCGACCAAGCTGGGAGAACTCCGCAACCTCCGAACCGTCGATCTCAGCTACAACCAGCTCACTGGACGCATTCCTCCAACGGTAGGAACCCTACCGGAGCTAACAAACCTAATCCTCTGCCACAACCGCCTCTCCGGTTCGGTTCCCCGGTTCGAGTCGCACACACTAACCCGGCTCGATCTGAAGCACAACTCTCTCTCCGGTTCGCTCCCTCCCAACTCTCTCCCTCCCTCTCTCCAGTACCTCTCTCTTTCCTGGAACCAGCTCACGGGCCCAATGGACCGCCTCCTAGCCCGCCTCGACCAGGTCAAGTATTTGGACCTAAGCCTAAACAAGTTCACGGGCCCAATCCCGGGCCATATCTTTTCCTTTCCGCTGACAAATCTGCAGCTAGAAAGGAACCAGTTCTCGGGCCCGGTCCAGCCCGTGGATCAGGTTTCCATCCCGACCGTTGATCTCAGTTACAACCGGTTGTATGGTCAGATATCACCGATGCTGGCGACAGTGCAGAATCTTTACCTGAACAACAACCGGTTCACGGGTCGGGTTCCGGCTAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATTCAGATACTTTACTTGCAGCATAACTATCTGACGGGGATTGAGATAAGCCCAACGGCGGTGATTCCAGAAAGAAGCTCGCTGTGTCTGCAGTATAACTGCATGGTCCCTCCCGTAGAGACGCCCTGCCCCTTGAGGGCTGGCAAGGAGAAAACCAGGCCTACTACGCAGTGCAACCAGCTGAAGGATTTGAAGGACTGA 1200 0.5608 MTSSSSSSYALLLFFFCFLQLEAILDPADFLALQNIRKALQDMPASDFFSSWDFTADPCNFAGVYCDSDKVIALNLGDPRAGSPGLTGRLHPSVGKLSALAEFTVVPGRIYGPLPETLSDLKNLRFLGVNRNFISGEIPTKLGELRNLRTVDLSYNQLTGRIPPTVGTLPELTNLILCHNRLSGSVPRFESHTLTRLDLKHNSLSGSLPPNSLPPSLQYLSLSWNQLTGPMDRLLARLDQVKYLDLSLNKFTGPIPGHIFSFPLTNLQLERNQFSGPVQPVDQVSIPTVDLSYNRLYGQISPMLATVQNLYLNNNRFTGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKEKTRPTTQCNQLKDLKD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01375 399 Gene3D Ribonuclease Inhibitor 192 369 IPR032675 -
Gma02g01375 399 Pfam Leucine Rich repeat 191 206 IPR001611 GO:0005515
Gma02g01375 399 Pfam Leucine Rich repeat 215 229 IPR001611 GO:0005515
Gma02g01375 399 SUPERFAMILY L domain-like 48 369 - -
Gma02g01375 399 MobiDBLite consensus disorder prediction 379 399 - -
Gma02g01375 399 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Gma02g01375 399 Pfam Leucine Rich Repeat 147 166 IPR001611 GO:0005515
Gma02g01375 399 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 12 393 - -
Gma02g01375 399 PANTHER LRR RECEPTOR-LIKE KINASE 12 393 - -
Gma02g01375 399 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01375 Gma-Chr2 15920559 15921758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01375 24 346 Receptor kinase-like Gene Family AT3G51740 32.778 1.50e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01375 - - gmx:100794756 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01375 02 15920559 15921758 Gma02g01375 02 15920559 15921758 ECH
Gma10g00222 10 2046541 2047955 Gma02g01375 02 15920559 15921758 GST
Gma19g01433 19 43604934 43606566 Gma02g01375 02 15920559 15921758 PCT
Gma03g01367 03 39855794 39856972 Gma02g01375 02 15920559 15921758 PCT
Gma02g01375 02 15920559 15921758 Gma19g01433 19 43604934 43606566 PCT
Gma02g01375 02 15920559 15921758 Gma03g01367 03 39855794 39856972 PCT