Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02482 ATGTCAGGCTTGTATAATCCCAACTTCTCTCCTGCTAGAGCTGCTTCTCCTCAGATTAGGAGCAATCCAGAAGTGGACAGCCAGTACCTATCAGAGTTGCTGGCAGAACATCAGAAGCTTGGACCCTTCATGCAAGTGCTTCCCATATGCAGCCGCCTCCTAAATCAAGAAATATTAAGAGTTTCTGGAATGTTGTCCAATCAAGGTTTTGGTGACTTTGATAGACTGCGACATAGAAGCCCTAGTCCTATGGCTTCTTCAAACCTTATGTCCAATGTAAGTGGGACAGGGTTGGGTGGATGGAATAGTCTTCAGCAAGAGAGATTATGTGGAGCCCCTGGAATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCTAGTTCGTTCACTGTTAAGAGAATCTTGCGCTTGGAAATTCCAGTAGATACATATCCCAATTTCAATTTTGTTGGAAGACTTCTGGGGCCTAGAGGAAATTCTTTGAAACGGGTTGAAGCTACAACTGGTTGTCGTGTGTATATTAGAGGAAAAGGGTCGATAAAGGATCCAGACAAGGAAGAGAAATTACGAGGAAGACCGGGCTATGAGCATCTCAATGAACCACTGCACATTTTGATTGAGGCTGATTTACCTGCTAATGTTGTTGACATAAGGCTCAGGCAGGCTCAGGAAATTATTGAAGAACTGCTCAAGCCTGTGGATGAGTCACAGGACTACATCAAGAGGCAGCAATTGCGTGAACTTGCTTTGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGACCAAGTGGTAGTGTGTCCCCATTCAACTCTAGTGGAATGAAACGTGCAAAGACGGGTCGCTGA 846 0.4504 MSGLYNPNFSPARAASPQIRSNPEVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02482 281 CDD SF1_like-KH 136 256 - -
Gma09g02482 281 SMART kh_6 131 231 IPR004087 GO:0003676
Gma09g02482 281 PANTHER RNA-BINDING PROTEIN RELATED 2 281 IPR045071 -
Gma09g02482 281 MobiDBLite consensus disorder prediction 256 281 - -
Gma09g02482 281 Pfam Homodimerisation region of STAR domain protein 23 72 IPR032377 -
Gma09g02482 281 MobiDBLite consensus disorder prediction 1 21 - -
Gma09g02482 281 Pfam KH domain 148 184 IPR004088 GO:0003723
Gma09g02482 281 ProSiteProfiles Type-1 KH domain profile. 148 205 - -
Gma09g02482 281 PANTHER STAR PROTEIN, HOMODIMERIZATION REGION-RELATED 2 281 - -
Gma09g02482 281 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 138 256 IPR036612 GO:0003723
Gma09g02482 281 Gene3D K Homology domain, type 1 19 262 IPR036612 GO:0003723
Gma09g02482 281 MobiDBLite consensus disorder prediction 254 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02482 Gma-Chr9 50158502 50165685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02482 K14945 - gmx:100797384 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02017 18 53469126 53474887 Gma09g02482 09 50158502 50165685 GST
Gma09g02482 09 50158502 50165685 Gma03g00016 03 250348 254578 PCT
Gma03g00016 03 250348 254578 Gma09g02482 09 50158502 50165685 PCT