Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02404 ATGTGCAAGGTTGTGCGATTCGCGGCGGCGGCCAGATTGCGGCGATTATCGACGGCGATTCCCGGTCCATGCAAGGTTCAAAAGCGTGGCACTGATATCCTCCACGATCCTTGGTTCAACAAGGATACTGGGTTTCCTTTAACTGAAAGGGATCGATTGGGGCTTCGGGGCCTCCTTCCTCCTCGTGTCATTTCATTTGAGCATCAATATGATCGGTTTATGAATTCATACAGATCTTTGGAGAAGAATACACGGGGCCAATCAGATAAGTTTGTTTCTTTATCCAAATGGAGGATCTTAAATAGATTGCATGACAGGAATGAGATTCTATATTACAGAGTTCTTATTGATAACATCAAAGAGTTTGCTCCAATAATCTATACCCCCACAGTTGGGTTAGTGTGTGAAAATTATTCAGGGTTATTTAGACGCCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCATCTGATCAGGTAGACATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGCTTGGGTGACCTTGGAGTTCAGGGCATTGGAATACCTATAGGAAAACTTGACATGTATGTTGCTGCTGCTGGTATCAATCCACGAAAAATACTTCCAGTTATGTTAGATGTTGGCACAAACAATCAAAAGCTACTCGAAGATCCCCTTTATTTAGGAGTTCGACAACCTAGGTGGGAAGGTGAAGCGTATCTATCAATTGTGGATGAATTCATGGAAGCTGTACACACTCGATGGCCTAAGGCTATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGAAACGATATCGAGAAAGGTTTTGCATGTTTAATGATGATATACAGGGCACAGCTGGTGTTGCACTTGCTGGACTATTGGGAACTGTAAGGTCCCAAGGTCGACCATTGTCTGATTTTTTGAAGCAAAAGATAGTTGTGGTTGGAGCTGGGAGTGCAGGGCTTGGTGTTCTTAGCATGGCTGTCCAAGCTGTTTCTAGGATGTCAGGGGGCAGTGAAACAGCTGCCAACAGTCAATTTTTTTTAATTGATAAAGATGGTCTTGTCACAACAGAAAGGAGCAATCTAGATCCAGCTGCAGTTCCATTTGCCAAAAATCCAAGAGATCTTGAAGGGCTTTCAGAGGGCGCTAGTGTAATTGAAGTGGTTAAGAAGGTTAAGCCACATGTGCTCCTTGGATTGTCTGGAGTTGGTGGTGTTTTCAATGCAGAGGTGCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCTGCTATCTTTGCAATGTCTAATCCCACCATGAATGCTGAGTGCACTGCTATTGAAGCTTTCAGTCATGCTGGAGAAAATATAGTGTTTGCAAGTGGAAGCCCTTTTGAAAATGTAGATCTTGGAAATGGAGAAGTTGGCCATGTAAATCAAGCCAACAACATGTACCTGTTCCCAGGGATTGGTTTGGGAACACTTCTGTCAGGTGCTCGTCATATAACGGATGGAATGTTGCGAGCAGCAGCTGAATGCCTTGCTTCATACATGACAGATGAGGATGTCCAAAAGGGAATCTTGTACCCATCCATTGACTGTATACGAGATGTTACAGCAGAGGTTGGGGCTGCTGTTGTACATGCAGCGGTTGCAGAAAAGCAGGCTGAAGGACATGGTGATGTAGGGTTCAAAGAGCTAGCAAACATGTCAAAAGAAGAAACCGTGGAGTATGTCCGAGGCAATATGTGGTACCCTGAGTATTGCCCTCTTGTTCATGAAAAATAG 1806 0.4369 MCKVVRFAAAARLRRLSTAIPGPCKVQKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEHQYDRFMNSYRSLEKNTRGQSDKFVSLSKWRILNRLHDRNEILYYRVLIDNIKEFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMMSMIYNWPSDQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPRKILPVMLDVGTNNQKLLEDPLYLGVRQPRWEGEAYLSIVDEFMEAVHTRWPKAIVQFEDFQMKWAFETLKRYRERFCMFNDDIQGTAGVALAGLLGTVRSQGRPLSDFLKQKIVVVGAGSAGLGVLSMAVQAVSRMSGGSETAANSQFFLIDKDGLVTTERSNLDPAAVPFAKNPRDLEGLSEGASVIEVVKKVKPHVLLGLSGVGGVFNAEVLKAMRESVSTKPAIFAMSNPTMNAECTAIEAFSHAGENIVFASGSPFENVDLGNGEVGHVNQANNMYLFPGIGLGTLLSGARHITDGMLRAAAECLASYMTDEDVQKGILYPSIDCIRDVTAEVGAAVVHAAVAEKQAEGHGDVGFKELANMSKEETVEYVRGNMWYPEYCPLVHEK 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02404 601 Pfam Malic enzyme, NAD binding domain 294 556 IPR012302 GO:0051287
Gma09g02404 601 SMART malic_2 104 284 IPR012301 GO:0004471
Gma09g02404 601 PRINTS Malic enzyme signature 110 134 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 PRINTS Malic enzyme signature 170 199 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 PRINTS Malic enzyme signature 206 228 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 PRINTS Malic enzyme signature 265 283 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 PRINTS Malic enzyme signature 290 306 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 PRINTS Malic enzyme signature 324 340 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 PRINTS Malic enzyme signature 433 449 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 294 598 IPR036291 -
Gma09g02404 601 PIRSF ME 7 600 IPR001891 GO:0004470|GO:0004471
Gma09g02404 601 Pfam Malic enzyme, N-terminal domain 104 284 IPR012301 GO:0004471
Gma09g02404 601 Gene3D - 28 291 IPR037062 GO:0004471
Gma09g02404 601 PANTHER MALIC ENZYME 9 597 - -
Gma09g02404 601 ProSitePatterns Malic enzymes signature. 290 306 IPR015884 GO:0004471
Gma09g02404 601 Gene3D - 292 601 - -
Gma09g02404 601 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 16 293 IPR046346 -
Gma09g02404 601 SMART Malic_M_2 294 557 IPR012302 GO:0051287
Gma09g02404 601 PANTHER MALIC ENZYME-RELATED 9 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02404 Gma-Chr9 49350315 49358258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02404 K00028 - gmx:100775394 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02404 09 49350315 49358258 Gma09g02404 09 49350315 49358258 ECH
Gma18g02114 18 54862612 54870486 Gma09g02404 09 49350315 49358258 GST
Gma09g02404 09 49350315 49358258 Gma07g00679 07 7063763 7071542 PCT
Gma07g00679 07 7063763 7071542 Gma09g02404 09 49350315 49358258 PCT