Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00679 ATGTGGAAACTCGTGCGATATGCCGCCGCCTCCAACCTCGCCCGATCGCGGCGGTTCTCCGCCGCGATTCCTGGTCCGTGCATTGTTCACAAGCGCGGTGCCGACATACTCCATGACCCCTGGTTCAACAAGGATACAGGGTTTCCTTTGACTGAAAGGGATAGGTTGGGGCTTCGGGGCCTCTTACCTCCTCGTGTTATATCCTTTGAGCAGCAATATGATCGCTTTATGAATTCATTCCGATCTTTGGAGAATAATACTCAGGGGCAACCAGATAAAGTTGTTTCCTTGGCAAAATGGAGGATCTTAAATAGACTGCATGATAGGAATGAGACTTTGTACTACAGAGTTCTTATTGATAATATTAAAGAGTTTGCTCCAATAATATATACTCCTACAGTTGGATTAGTGTGTCAAAATTATTCAGGGTTATTTAGGCGTCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCAGCTCACGAGGTAGACATGATTGTCTTAACAGATGGAAGTCGAATTCTTGGCTTAGGTGACCTTGGAGTTCAGGGAATTGGAATCCCCATAGGAAAACTTGATGTGTATGTTGCTGCTGCTGGTATCAACCCACAAAGAATACTTCCAGTTATGCTGGATGTTGGTACCAACAATCAAAAGTTACTTGAAGATCGCCTTTATTTAGGACTTCGACAACCAAGGTTGGAAGGTGAAGAGTATCTATCAATTATAGATGAATTCATGGAAGCTGTTCATGCTCGATGGCCCAAGGCTATTGTGCAGTTTGAGGATTTTCAAATGAAGTGGGCTTTTGAAACCCTGAAAAGATATCAGAAAAAGTTTTGCATGTTTAATGATGATATACAGGGCACTGCAGGTGTTGCACTTGCTGGACTATTGGGAACTGTAAGAGCCCAAGGCCGGCCATTGACTGATTTTGTGAACCAAAAGATAGTTGTGGTTGGAGCTGGGAGTGCAGGACTTGGGGTTCTAAAAATGGCCATCCAAGCAGTTGCAAAGATATCTGGGTGCAGTGAATTAGCTGCCAAAAGCCAATTCTATTTGATTGATAAAGATGGTCTAGTTACAACAGAGAGGAACAATCTAGACCCAGCTGCAGCTCCATTTGCTAAAAATCCAAGAGACATAGAAGGGCTTACTGAGGGTGCTAGTATAATTGAAGTGGTTAAGAAGATTAGGCCACATGTGCTCCTTGGTTTGTCTGGCGTTGGTGGTATTTTCAATGAGGAGGTGCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCTGCTATCTTTGCCATGTCTAACCCCACCATGAATGCTGAGTGCACTGCTATTGATGCTTTTAAGCATGCTGGGGAAAATATGGTGTTTGCAAGTGGAAGCCCTTTCGAAAACGTAGATCTTGGTAATGGAATTGTGGGTCATGTAAATCAAGCAAACAACATGTACCTCTTCCCAGGAATTGGTTTGGGAACCCTTCTGTCAGGTGCTCACCTTATAACAGATGGAATGTTGCAGGCAGCTGCTGAATGCCTTGCTTCATACATGGCCGAGGAAGATATCTTAAAAGGAATTTTATATCCATCCGTTGATAGCATACGAGATGTTACGGCAGAGGTTGGGGCTGCTGTGCTTCGAGCAGCAGTTGAAGAAGAACTGGCAGAAGGAAATGGTGATGTGGGGCCCAAAGAACTTTCCCATATGTCGAAAGATGAGACTGTGGAGTATGTGCGAAGCAATATGTGGTATCCTGTGTATTCTCCTCTCGTTCATGAAAAATGA 1815 0.4369 MWKLVRYAAASNLARSRRFSAAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYDRFMNSFRSLENNTQGQPDKVVSLAKWRILNRLHDRNETLYYRVLIDNIKEFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAHEVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIIDEFMEAVHARWPKAIVQFEDFQMKWAFETLKRYQKKFCMFNDDIQGTAGVALAGLLGTVRAQGRPLTDFVNQKIVVVGAGSAGLGVLKMAIQAVAKISGCSELAAKSQFYLIDKDGLVTTERNNLDPAAAPFAKNPRDIEGLTEGASIIEVVKKIRPHVLLGLSGVGGIFNEEVLKAMRESVSTKPAIFAMSNPTMNAECTAIDAFKHAGENMVFASGSPFENVDLGNGIVGHVNQANNMYLFPGIGLGTLLSGAHLITDGMLQAAAECLASYMAEEDILKGILYPSVDSIRDVTAEVGAAVLRAAVEEELAEGNGDVGPKELSHMSKDETVEYVRSNMWYPVYSPLVHEK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00679 604 SMART malic_2 107 287 IPR012301 GO:0004471
Gma07g00679 604 CDD NAD_bind_1_malic_enz 297 595 - -
Gma07g00679 604 Gene3D - 295 604 - -
Gma07g00679 604 PIRSF ME 7 603 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 PANTHER MALIC ENZYME 1 600 - -
Gma07g00679 604 Pfam Malic enzyme, N-terminal domain 107 287 IPR012301 GO:0004471
Gma07g00679 604 SMART Malic_M_2 297 560 IPR012302 GO:0051287
Gma07g00679 604 PRINTS Malic enzyme signature 113 137 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 PRINTS Malic enzyme signature 173 202 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 PRINTS Malic enzyme signature 209 231 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 PRINTS Malic enzyme signature 268 286 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 PRINTS Malic enzyme signature 293 309 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 PRINTS Malic enzyme signature 327 343 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 PRINTS Malic enzyme signature 436 452 IPR001891 GO:0004470|GO:0004471
Gma07g00679 604 Pfam Malic enzyme, NAD binding domain 297 559 IPR012302 GO:0051287
Gma07g00679 604 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 20 296 IPR046346 -
Gma07g00679 604 Gene3D - 31 294 IPR037062 GO:0004471
Gma07g00679 604 PANTHER MALIC ENZYME-RELATED 1 600 - -
Gma07g00679 604 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 297 601 IPR036291 -
Gma07g00679 604 ProSitePatterns Malic enzymes signature. 293 309 IPR015884 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00679 Gma-Chr7 7063763 7071542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00679 K00028 - gmx:100806545 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00679 07 7063763 7071542 Gma07g00679 07 7063763 7071542 ECH
Gma18g02114 18 54862612 54870486 Gma07g00679 07 7063763 7071542 PCT
Gma09g02404 09 49350315 49358258 Gma07g00679 07 7063763 7071542 PCT
Gma07g00679 07 7063763 7071542 Gma18g02114 18 54862612 54870486 PCT
Gma07g00679 07 7063763 7071542 Gma09g02404 09 49350315 49358258 PCT