Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02402 ATGCTTTTGCTACCAAATCACACTTGTGACTTGACAAATGAATGGCAAAAGCAATTGCTTGTCTTATTTGAATATTTCCTACGTTCTTCATGCACCCACGTCCCCACTTGCGCCAGTGTGCCACCACCACTACAAAATTTGTACGTGTCAAAAAGAATTAAAGTTGTGGAAAAAGGACAGCATCAACTAACCTTGATTTTATTTGCGACCCTTTTTTTTTTGAGAAAACTGCACCTCTATTTTCTATACATATTATCCAATATATTTGGACTCTCTCTCTTCTTCACATGCTCATTGGCTTTCAGCATATCTATGGCAGAGGCAAAACTAAGGTATGCTGTTGTTACTGGAGCAAACAAAGGGATAGGATTTGAGACTGTAAAAGAGCTGGCCTCAAATGGAGTCAAGGTGGTGCTCACAGCAAGAGATGAGAAAAAAGGCCATGAAGCCTTTGAGAGATTGAAAGAGTGTGGTTTCTCTGATTTGGTTATTTTTCACCAGCTTGATGTCACTGAATCTGCTAGTATTTCTTCACTAGTAGAGTTTGTTAAGACCAATTTTGGGAAGCTTGATATATTGGTGAACAATGCAGGAATCAGTGGTGCCAATCTGGATGAAGTGGAAGGATCAACATTTAAATGGGAGGAACTGACTCAAACCAATGAGATGACTGAAAAGTGCCTAACAACAAACTACTATGGTGCAAAGAAAACAACTGAGGCATTTCTTACCCTTCTGCAGTTATCCAATTCACCTAGGATTGTTAATGTTTCCTCCCAAGCAGGGTTGTTAAAGAACATATCAAACGAATGGGCTAAAGGGGTGCTTGATGATGCTGATAATCTTACAGAAGAGAGAATAGACGAGGTACTCAAAGAGTTTATCAAAGACTTCAAAGAAGGTTCATTAGCAACCAAAGGGTGGCCAACCTTCTTGTCTGCATATATTGTCTCAAAAGCAGCCATGAATTCATACACAAGGATTCTAGCCAAGAAGCACCAAAACATGTGCATTAACAGTGTGTGCCCTGGTTTTGTCAAAACAGACATAAACAAAAACACTGGCATCTTAACCGTTGACCAAGGTGCTGCTAGTGTTGTGAAATTGGCACTGGCGAACAAAGGGATAGGATTAGAGACTGTTAAAGTTTTGGACTCAAATGTAATCAAGGTGGTGCTCACAGCCAGATATGAGGACAAAGGCCATGAAGCCATTGAGAGACTGAAAGAGTGTGGTCTTTCTAATTTGGTGATTTATCACCAGCTTGATGTCACTGACTCTGCTAGTATTGCTTCATTAGTTGACTTTGTTAAGAGCCAGTTTGGGAAACTTGATATCTTGGTAAGAAAGCATGCTGATATGATATTGAATATTCTCAAATCTCAACAATGGAATTCATTTTCATGGGAGGAACTTGCTCAAACCTATGAGATGGCTGAAAAGTGCTTAACAACAAACTATTATGGGGCAAAGGAAACAACTGAGGCATCTTTTCCCCTTCTGCCGACATCCAATTCACCTCGGATTGTTAATTTTTCCTTGCGAGCAGGGCAGTTAGTGAACATAGCGAACGAATGGGCAAAAGGGGTGCTTGATGATGTTGAAAATCTTACAGAAGAGAGAATAGACATAAATAGAAACACTGGCATCTATTCCATTGACCAAGGTGCTGCTAATGTTGTGAAATTTGCATTGTTGCCTGATGGTTCCCCTTCTGGCCTCTTCTATATAGGGAAAAGGTATTCAAGTATGCATACATACAGCCAAACATATGTGGAGGTGGACATACATATGACTTGTTTGAATTTGGGTATGGAGCATGAAGCTGACGCATTTGTAAATATTCCATGTTAA 1854 0.3991 MLLLPNHTCDLTNEWQKQLLVLFEYFLRSSCTHVPTCASVPPPLQNLYVSKRIKVVEKGQHQLTLILFATLFFLRKLHLYFLYILSNIFGLSLFFTCSLAFSISMAEAKLRYAVVTGANKGIGFETVKELASNGVKVVLTARDEKKGHEAFERLKECGFSDLVIFHQLDVTESASISSLVEFVKTNFGKLDILVNNAGISGANLDEVEGSTFKWEELTQTNEMTEKCLTTNYYGAKKTTEAFLTLLQLSNSPRIVNVSSQAGLLKNISNEWAKGVLDDADNLTEERIDEVLKEFIKDFKEGSLATKGWPTFLSAYIVSKAAMNSYTRILAKKHQNMCINSVCPGFVKTDINKNTGILTVDQGAASVVKLALANKGIGLETVKVLDSNVIKVVLTARYEDKGHEAIERLKECGLSNLVIYHQLDVTDSASIASLVDFVKSQFGKLDILVRKHADMILNILKSQQWNSFSWEELAQTYEMAEKCLTTNYYGAKETTEASFPLLPTSNSPRIVNFSLRAGQLVNIANEWAKGVLDDVENLTEERIDINRNTGIYSIDQGAANVVKFALLPDGSPSGLFYIGKRYSSMHTYSQTYVEVDIHMTCLNLGMEHEADAFVNIPC 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02402 617 Gene3D - 105 373 - -
Gma09g02402 617 Gene3D - 374 584 - -
Gma09g02402 617 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 372 520 IPR036291 -
Gma09g02402 617 PRINTS Glucose/ribitol dehydrogenase family signature 112 129 IPR002347 -
Gma09g02402 617 PRINTS Glucose/ribitol dehydrogenase family signature 315 334 IPR002347 -
Gma09g02402 617 PRINTS Glucose/ribitol dehydrogenase family signature 334 351 IPR002347 -
Gma09g02402 617 PRINTS Glucose/ribitol dehydrogenase family signature 246 262 IPR002347 -
Gma09g02402 617 PRINTS Glucose/ribitol dehydrogenase family signature 188 199 IPR002347 -
Gma09g02402 617 Pfam short chain dehydrogenase 304 353 IPR002347 -
Gma09g02402 617 Pfam short chain dehydrogenase 112 266 IPR002347 -
Gma09g02402 617 Pfam short chain dehydrogenase 372 518 IPR002347 -
Gma09g02402 617 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 199 IPR002347 -
Gma09g02402 617 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 252 260 IPR002347 -
Gma09g02402 617 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 315 334 IPR002347 -
Gma09g02402 617 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 372 543 - -
Gma09g02402 617 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 111 371 - -
Gma09g02402 617 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 542 583 - -
Gma09g02402 617 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 111 371 - -
Gma09g02402 617 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 542 583 - -
Gma09g02402 617 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 372 543 - -
Gma09g02402 617 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 111 371 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02402 Gma-Chr9 49338224 49344241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02402 114 355 Acyl Lipid Metabolism Gene Families AT1G24360 22.857 7.80e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02402 K15095 - gmx:100527070 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02402 09 49338224 49344241 Gma09g02402 09 49338224 49344241 ECH
Gma09g02402 09 49338224 49344241 Gma07g00677 07 7018735 7021646 PCT
Gma07g00678 07 7045441 7057657 Gma09g02402 09 49338224 49344241 PCT