Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00678 ATGGGAGAAGCTACAGAAAGGTATGCAGTTGTGACAGGTGCAAACAAAGGAATTGGATTAGAGATAGTTAGACAATTAGCTTCAGCTGGAATCAAGGTGGTTCTCACAGCAAGAAATGAAGAAAGGGGTCTCAAAGCACTGGAAACAGTCAAGGACTCAGGTCTATCTCACCTTGTACTGTTTCATCAAGTGGATGTGGCTGATGCAACAAGTGTAGCTTCTCTGGCAGATTTTATCAAATCTAAATTTGGGAAACTTGATATTCTGATTAACAATGCAGGGATTAGTGGAGTTGTAATTGATGACACTGATTTAATCACTACAGTCATCAAGAATCGTGGGGTAACACCAGAAGAAGATGTGACAAAGGCAATCACTCAATCATATGAGTTGGCTGAAGAATGCTTGCAAATAAATTACTATGGTGCTAAAACAACTGTAGAATCCCTTCTGCCCCTCCTCCAGTTATCTGATTCACCGAGAATTGTGAATGTATCATCAACTATGGGGCAGTTAGAGAGTTTGCCAAAAGGATCATGGGCTAGAGAAGTCTTCAGTGATGCCAATATCATCACTGAAGAGAAAGTGGATGAAATATTGAAGAAGTTTTTGAGAGATTTCCAAGAAGGCTCATTAGAAAGTAATGGGTGGCCAAGACATCTGGGTGCTTATATTGTCTCTAAAGCTGCTATGAATGCGTATACTAGAATCCTTGCTAAGAAATACCCTTCATTCTGCATCAATAGTGTTTGCCCTGGTTATGTCAAGACAGATATAACTGCCAACACTGGCCTCTTAACAGTTGAAGAAGGTGCAGCTAGTCCTGTGAGGCTAGCATTGCTTCCCAATGGTAGTCCATCTGGCCTTTTCTATTACCGGAGCGATGTGGCTTCCTTTTGA 900 0.4122 MGEATERYAVVTGANKGIGLEIVRQLASAGIKVVLTARNEERGLKALETVKDSGLSHLVLFHQVDVADATSVASLADFIKSKFGKLDILINNAGISGVVIDDTDLITTVIKNRGVTPEEDVTKAITQSYELAEECLQINYYGAKTTVESLLPLLQLSDSPRIVNVSSTMGQLESLPKGSWAREVFSDANIITEEKVDEILKKFLRDFQEGSLESNGWPRHLGAYIVSKAAMNAYTRILAKKYPSFCINSVCPGYVKTDITANTGLLTVEEGAASPVRLALLPNGSPSGLFYYRSDVASF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00678 299 Pfam short chain dehydrogenase 8 172 IPR002347 -
Gma07g00678 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 299 - -
Gma07g00678 299 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 299 - -
Gma07g00678 299 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Gma07g00678 299 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Gma07g00678 299 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Gma07g00678 299 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Gma07g00678 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Gma07g00678 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Gma07g00678 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Gma07g00678 299 CDD carb_red_PTCR-like_SDR_c 7 296 IPR045313 GO:0016616
Gma07g00678 299 Gene3D - 3 299 - -
Gma07g00678 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 285 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00678 Gma-Chr7 7045441 7057657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00678 9 261 Miscellaneous Gene Families AT2G29150 27.519 6.76e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00678 K15095 - gmx:102663482 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00678 07 7045441 7057657 Gma07g00678 07 7045441 7057657 ECH
Gma07g00678 07 7045441 7057657 Gma09g02402 09 49338224 49344241 PCT