Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02379 ATGGCCAAGGAAGATGTGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCTGTAAGGAAGATATCTGAGCTTGTGATTCTCAAACACTATGAGCCGGGAGAGTATGTTGTTCGTGAGGGAGAACGTGGGGATGGTCTTTACTTCATCTGGGAGGGAGAGGCTGAGGTTGTTGGCTCTGTTAATGCTGACGATGATAATCATCCAGAGTTTCAATTGAAAAGATTTGACTATTTTGGTTTTGGTTTATCAAATGAAGTTCACCATGCTGATGTTGTAGCTTTGACAAAGCTATCATGCTTGGTGCTGCCCCATGAGCACTCAGCATTGCTGCAGCCAAAGTCTATTTGGAGTGCAGAAAAATCTCATGATACATGCTCACTTGTGGAGCATATATTGCATTTGGACCCTATAGAGGTAGACATCTTCCGAGGAATCACTCCTCCAGATGCTCCAACATTTGGGAAGGTATTTGGTGGACAAATAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCGTAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACATACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTACAAGGAAAGTGGATGCAATTCAAAAGGGAAATGTCATATTCACTTTGTTGGCTTCATTTCATAAGGAAGAAGTAGGGTTTCACCACCAGGAAGTGTCTATCCCATCAGTCCCTGCTCCAGATACGCTTTTATCGTTGGAAGAGCTTCGGGAGCAACGTCTTACTGACCCTCGTCTTCCAAGAACTTACCGGAACAAGGTTGCTACAATTGAATTCATTCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAAAATTTCAACAAATCAGACCAAATCTCCTCCTAGTTTGAGATACTGGTTTAGAGCAAGGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTAGCATATACATCAGATCTAATCTTCCTTCAAGTGAGTTTGAACCCCAACCGTAGGAAGGGAAGGAAGGCTCGTGCTGTGAGTCTGGACCACTCCATGTGGTTTCACAGACCTTTAAGAGCTGATGATTGGATACTATTTGTGATCTTTAGTCCTACTGCCAATAATGCCCGCGGCTATGTCACTGGCCAAATGTTCAATCAGAAGGGAGAGCATCTTGTGTCTGTGGTTCAAGAAGGTGTAATGAGGGAAGTTATTTCTGCTAAGTCAGCCATCAAATCTAATCTATGA 1290 0.4372 MAKEDVFEFLGNVPLLQRLPGSSVRKISELVILKHYEPGEYVVREGERGDGLYFIWEGEAEVVGSVNADDDNHPEFQLKRFDYFGFGLSNEVHHADVVALTKLSCLVLPHEHSALLQPKSIWSAEKSHDTCSLVEHILHLDPIEVDIFRGITPPDAPTFGKVFGGQIVGQALAAASKSVDCRKVVHSLHVYFLLVGDFNIPIIYQVKRLRDGKSFATRKVDAIQKGNVIFTLLASFHKEEVGFHHQEVSIPSVPAPDTLLSLEELREQRLTDPRLPRTYRNKVATIEFIPWPIEIRFCEPKISTNQTKSPPSLRYWFRARGKLSDDQALHRCVVAYTSDLIFLQVSLNPNRRKGRKARAVSLDHSMWFHRPLRADDWILFVIFSPTANNARGYVTGQMFNQKGEHLVSVVQEGVMREVISAKSAIKSNL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02379 429 SMART cnmp_10 15 132 IPR000595 -
Gma09g02379 429 CDD Thioesterase_II_repeat1 313 415 - -
Gma09g02379 429 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Gma09g02379 429 SUPERFAMILY cAMP-binding domain-like 6 112 IPR018490 -
Gma09g02379 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Gma09g02379 429 PANTHER ACYL-COA THIOESTERASE 51 429 IPR003703 GO:0006637|GO:0047617
Gma09g02379 429 Gene3D - 129 418 IPR042171 -
Gma09g02379 429 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Gma09g02379 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 133 240 IPR029069 -
Gma09g02379 429 Pfam Thioesterase-like superfamily 160 415 - -
Gma09g02379 429 CDD CAP_ED 15 112 IPR000595 -
Gma09g02379 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 416 IPR029069 -
Gma09g02379 429 TIGRFAM tesB: acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Gma09g02379 429 CDD Thioesterase_II_repeat2 146 238 - -
Gma09g02379 429 PANTHER ACYL-COA THIOESTERASE 51 429 - -
Gma09g02379 429 Gene3D Jelly Rolls 2 123 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02379 Gma-Chr9 49154913 49162441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02379 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 67.832 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02379 K01068 - gmx:100813197 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02379 09 49154913 49162441 Gma09g02379 09 49154913 49162441 ECH
Gma18g02144 18 55078310 55085400 Gma09g02379 09 49154913 49162441 GST
Gma09g02379 09 49154913 49162441 Gma07g00653 07 6755226 6762397 PCT
Gma07g00653 07 6755226 6762397 Gma09g02379 09 49154913 49162441 PCT