Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00653 ATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAGCGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGTCTCTGAGGAAGATAGCTCAACTTGTGGATGTCAAACACTGTGAGCCAGGAGAGTATGTTGTTCGCGAGGGTGAACCTGGAGATGGCGTGTACTTCATATTGGATGGAGAGGCTGAGGTTCTTGGATCTGCTAGGGCCAATGATGAAAATCGACCAGAGTTCCAATTGAAACAATATGACTACTTTGGTTATGGTAGTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAGCTCACATGCTTAGTGCTTCCCCATGTGCACTCAACACTGCTGCAGCCAAAGTCTATCTGGAGAGCAGAAAATTCTCTCCAGACATGCTCACCTGTGGAGAATATATTGCATTTGGAGCCCCTTGAGGTAGATATCTTCCAAGGAGTTACCCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGGCAGATGATTGGACAGGCACTGGCTGCAGCTTCAAAATCTGTTGACTGTCTTAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTTGCGGGGGATTTAAACATGCCAATTACATATCAAATTCACCGTCTCCGTGATGGAAAGAGCTTCGCTTCAAGGAAAGTGGATGGAATTCAAAAGGGAAATGTCATATTCACTCTGATGGCTTCATTTCAAAAAGAAGAATCAGGGATGGTCCACCAAGAGGTAGCTATACCATCTGTCCCTGCTCCAGATAAGGCAAGATACAAGCTTATGCCTCTTCTGCCGATGGAAGAGCTACGGGAGAGACGTCTTACTGACCCTCGTTTACCAATAACCTATCGGAACAAAGTAGCTACATCTCAATTCATCCCATGGCCCATAGAGATACGATTATGTGAATATGAAACTGCAACAAATATGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCCAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTGGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTGGACCACTCTATGTGGTTTCACCGATCCGTAAAAGCTGATGACTGGGTGCTATTTGCGATCTTTACTCCTAGTGCCCATAGTGCACGTGTCTTTGTCACCGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGACTAGCCAGGAAAATTAATCCCGGAAATTCAGCCATTAAATCTATGTTATGA 1341 0.4437 MELHCSVKKLENEKAFEFLGGVPLLQRLPSSSLRKIAQLVDVKHCEPGEYVVREGEPGDGVYFILDGEAEVLGSARANDENRPEFQLKQYDYFGYGSLSNTVHQADVVALSKLTCLVLPHVHSTLLQPKSIWRAENSLQTCSPVENILHLEPLEVDIFQGVTLPDAPRFGKVFGGQMIGQALAAASKSVDCLKVVHSLHAYFILAGDLNMPITYQIHRLRDGKSFASRKVDGIQKGNVIFTLMASFQKEESGMVHQEVAIPSVPAPDKARYKLMPLLPMEELRERRLTDPRLPITYRNKVATSQFIPWPIEIRLCEYETATNMTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHREKGFRTRSVSLDHSMWFHRSVKADDWVLFAIFTPSAHSARVFVTGQMFNQKGELLVSLVQEGLARKINPGNSAIKSML 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00653 446 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 51 67 IPR018488 -
Gma07g00653 446 CDD CAP_ED 24 120 IPR000595 -
Gma07g00653 446 ProSiteProfiles cAMP/cGMP binding motif profile. 24 94 IPR000595 -
Gma07g00653 446 PANTHER ACYL-COA THIOESTERASE 60 446 - -
Gma07g00653 446 SUPERFAMILY cAMP-binding domain-like 15 120 IPR018490 -
Gma07g00653 446 CDD Thioesterase_II_repeat2 156 248 - -
Gma07g00653 446 CDD Thioesterase_II_repeat1 330 431 - -
Gma07g00653 446 Gene3D - 139 435 IPR042171 -
Gma07g00653 446 TIGRFAM tesB: acyl-CoA thioesterase II 148 433 IPR003703 GO:0006637|GO:0047617
Gma07g00653 446 Pfam Cyclic nucleotide-binding domain 43 120 IPR000595 -
Gma07g00653 446 Pfam Thioesterase-like superfamily 171 431 - -
Gma07g00653 446 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 140 252 IPR029069 -
Gma07g00653 446 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 278 434 IPR029069 -
Gma07g00653 446 PANTHER ACYL-COA THIOESTERASE 60 446 IPR003703 GO:0006637|GO:0047617
Gma07g00653 446 SMART cnmp_10 24 142 IPR000595 -
Gma07g00653 446 Gene3D Jelly Rolls 5 134 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00653 Gma-Chr7 6755226 6762397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00653 10 446 Acyl Lipid Metabolism Gene Families AT1G01710 63.158 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00653 K01068 - gmx:100797680 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00653 07 6755226 6762397 Gma07g00653 07 6755226 6762397 ECH
Gma18g02144 18 55078310 55085400 Gma07g00653 07 6755226 6762397 PCT
Gma09g02379 09 49154913 49162441 Gma07g00653 07 6755226 6762397 PCT
Gma07g00653 07 6755226 6762397 Gma18g02144 18 55078310 55085400 PCT
Gma07g00653 07 6755226 6762397 Gma09g02379 09 49154913 49162441 PCT