LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g02031	ATGAGTTCAAAGGTGGTTTTTACAGTGGGGGACCCAGCCAGCGATCACTCTCTCATTCTCCGACACCCGGAagctccaaacgacgccgtgtgttgctgttgcagcattctttcagtctcttcttcttcttcttctcatacattcaaaggtggagcagttgaagaagctggtggggagggagcaatggggtccaataatcatggcaactcgaaGGAGTTTCTAGAACTCATAAAGTCCATCGGCGAGTCCCGATCCAAGGCCGAGGAGGACTGCATCGTCCTCCGCGAGATCGAAACCCTAAAACGCCGCATCAACGACGCTGACACTCCGAAACGCAAGATCAAGGAGTACATCATCCGCCTCCTCTATGTCGAGATGCTCGGCCACGACGCCTCCTTCGGATACATCCACGCCGTCAAGATGACTCACCACGACTCCCTCCTCCTGAAGCGCACCGGCTACCTCGCCCTCACGCTCTTCCTCAGCGACGACCACGACCTCATCATCCTCATCGTCAACACAATCCAGAAAGACCTCGCCTCCGATAACTACCTCGTCGTTTGCGCCGCTCTTAACGCCGTCTGCAGGCTCATCAACGAGGAGACCATCCCCGCCGTGCTTCCTCGTGTCGTCGAGCTTCTTCACCACTCCAAGGACGCCGTTAGGAAGAAGGCCGTTATGGCGCTGCACCGCTTCTACCTCAAATCTCCGTCCTCCGTTTCGCATTTGCTTTCTAATTTCCGTAAGCGGTTGTTCGATAACGATCCTGGTGTAATGGGCGCTTCTCTTTGCCCGCTTTCTAATATCGTTTCCGATGATGTTAACTCTTTTAAGGACCTTGTCGTTAGCTTTGTTAATATTCTCAAGCAAGTCGCAGAACATAGGTTGCCCAAGACTTATGATTATCACCAAATGCCTGCACCCTTCATTCAGATTAAGTTGCTGAAAATACTTGCGTTACTGGGAAGTGGCGACAAGCAAGCTAGTGGACACATGTACACTGTGCTTGGTGATATAATCAGGAGGAGTGATTCGATGACCAACATAGGGAATGCTGTTCTCTATCAGTGCATATGCTGTGTTGCTTCTATATATCCCAATCCTAAGTTATTAGAGGCTGCTGCGGATGTAATCGCAAAATTTTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAACAGCACCAACTTGCCGTCATTGACTGCTTGGAGGACCCAGATGATAGTCTGAAACGAAAAACTTTTGAACTGTTATACAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATGAGTGATGACCATTATAAAACTTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATTATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCACATAATTTGATGCGGTTGATTGCTGAAGGATTTGGAGAGGATGATGATGCTGCAGACAGTCAGTTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATAGGAGAGCCAAAGCTTCCATCAGTGTTTCTTCAAGTCATCTGTTGGGTTCTGGGGGAATATGGAACAGTAGATGGAAAGTATTCTGCTTCCTATATCAGTGGGAAGTTATGTGACATTGCAGAGGCATATTCCAATGATGAAAATGTTAAGGCTAATGCAATTTCAGCATTGATGAAAATTTATGCATTTGAAGTAGCAGCCGGGAGGAAAGTGGATATCCTATCTGAGTGCCAATCGTTGATTGAAGAATTATTGGCATCCCACTCTTCAGATCTGCAGCAACGTGCTTATGAATTGCAAGCCTTTATAGGTTTGGATGTACAAGCTGTTGAAACAATAATGCCACGAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGAATCTTTCTTTCCTCAATGGGTATGTTCAGCAGTCTTTAGAAAGAGGTGCTGAATCCTATATTCCTGAGGATGTGCGTGCTGGAATGGGGAATATGAAAAATTTCAGAAGCCAAGATCATCATGAAACTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGCCTCCAATGCAACCGAAAGTTACTCCAGTTTCATTTGCATCTTCAGCAGACATTGTTCCAGTGCCCGATGTATTGTCTTCCAGGGAGACCCACCATATCTCGTCAGTGGGATCAACTTCTGAGGTTGGATCATCAGAGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAGTGGGGTAAACCAACGTATTCATCTTCAACATCATCTGCCTCTGCCTCGTATTCTACTTCCCAAAAACCAACGAGTGGGGCAACTCTGGTGGATGGTGCTACAACTGTCAATTCAAAAGTGCATGATACTTATGATTCAAGAAAGACACAGGTTGAGATTACTCCAGAAAAGCAAAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAACCTGAGAAAAGATCATCTACAAGTCACAAGGTTTCAAAATCTAGTGCAAGTGCTGCAGACGGATCTCGGGGATCAAAGGCTGCGGTTGTACCCAATGAAGTAGCTGTGGAAAAAGCAATTCATCAACCACCTCCTGCTGATTTGCTTGACTTGGATGAACCAACTGTCACTACGGCTCCTCCTTCTGTGGACCCATTCAAGGAATTGGAAGGACTTCTTGACCCAAGCACTAATTCTGCAACAAATCATAATGTAGCTGCTGCTACAAATGCCCCTGATATTATGTCACTCTATGCCGAGACTACTGTCAGTGGTGGCGACTCTATACCCGTGAGTGGGGGGTATGATGTAAATCTTTTATCTGAATTGTCAAATGCAGCTACAAAAGCTACTCGTGAAGAAACAATTGTGAAGCCGTTGCCACAATCTATTAAGGGTCCAGATGCTAAAGATTCTTTGGAGAAGGATGCTTTAGTGAGGCAGATGGGTGTGAAGCCCTCAAGTCAGAATCCTAACTTGTTCAGTGACTTGCTTGGCTAA	3087	0.4295	MSSKVVFTVGDPASDHSLILRHPEAPNDAVCCCCSILSVSSSSSSHTFKGGAVEEAGGEGAMGSNNHGNSKEFLELIKSIGESRSKAEEDCIVLREIETLKRRINDADTPKRKIKEYIIRLLYVEMLGHDASFGYIHAVKMTHHDSLLLKRTGYLALTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVELLHHSKDAVRKKAVMALHRFYLKSPSSVSHLLSNFRKRLFDNDPGVMGASLCPLSNIVSDDVNSFKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKLLKILALLGSGDKQASGHMYTVLGDIIRRSDSMTNIGNAVLYQCICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISMSDDHYKTYIASRCVELAEQFAPSNYWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTVDGKYSASYISGKLCDIAEAYSNDENVKANAISALMKIYAFEVAAGRKVDILSECQSLIEELLASHSSDLQQRAYELQAFIGLDVQAVETIMPRDASCEDIEVDKNLSFLNGYVQQSLERGAESYIPEDVRAGMGNMKNFRSQDHHETLQHGLRFEAYEVPKPPMQPKVTPVSFASSADIVPVPDVLSSRETHHISSVGSTSEVGSSELKLRLDGVQKKWGKPTYSSSTSSASASYSTSQKPTSGATLVDGATTVNSKVHDTYDSRKTQVEITPEKQKLAASLFGGSTKPEKRSSTSHKVSKSSASAADGSRGSKAAVVPNEVAVEKAIHQPPPADLLDLDEPTVTTAPPSVDPFKELEGLLDPSTNSATNHNVAAATNAPDIMSLYAETTVSGGDSIPVSGGYDVNLLSELSNAATKATREETIVKPLPQSIKGPDAKDSLEKDALVRQMGVKPSSQNPNLFSDLLG	1028

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g02031	1028	SUPERFAMILY	ARM repeat	88	679	IPR016024	-
	Gma09g02031	1028	MobiDBLite	consensus disorder prediction	841	875	-	-
	Gma09g02031	1028	PIRSF	AP4_epsilon	61	740	IPR017109	GO:0015031\|GO:0030124
	Gma09g02031	1028	PIRSF	AP4_epsilon	693	891	IPR017109	GO:0015031\|GO:0030124
	Gma09g02031	1028	PIRSF	AP4_epsilon	918	1028	IPR017109	GO:0015031\|GO:0030124
	Gma09g02031	1028	Pfam	Adaptin N terminal region	102	641	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Gma09g02031	1028	Gene3D	-	59	654	IPR011989	-
	Gma09g02031	1028	MobiDBLite	consensus disorder prediction	1009	1028	-	-
	Gma09g02031	1028	MobiDBLite	consensus disorder prediction	780	809	-	-
	Gma09g02031	1028	PANTHER	AP-4 COMPLEX SUBUNIT EPSILON-1	65	1024	-	-
	Gma09g02031	1028	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	65	1024	-	-
	Gma09g02031	1028	MobiDBLite	consensus disorder prediction	781	809	-	-
	Gma09g02031	1028	MobiDBLite	consensus disorder prediction	1012	1028	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g02031	Gma-Chr9	45888792	45896942	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g02031	K12400		-	gmx:100780202	1907.11

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma09g02031	09	45888792	45896942	Gma09g02031	09	45888792	45896942	ECH
	Gma01g01573	01	51277350	51285824	Gma09g02031	09	45888792	45896942	GST