Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01573 atgggctctcaccatggccactcgaaggAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTCCTCCGTGAGATCGAAACCCTAAAACGCCTCCTCAACGACGCCGACACACCAAAACGCAAGATCAAGGAGTACATCATCCGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCGTCGTTCGGCTACATCCACGCCGTGAAGATGACTCACCACGACGCCCTCCTCCTCAAACGCACCGGCTACCTCGCCGTCACGCTCTTCCTCAGCGACGACCACGACCTCATCATCCTCATCGTCAACACAATCCAGAAGGATCTTGCCTCCGATAACTACCTCGTCGTTTGCGCCGCGCTTAACGCCGTTTGTAGACTCATCAACGAGGAGACCATCCCCGCCGTGCTGCCACGTGTTGTGGATCTGCTTAACCACTCCAAGGACGCCGTTAGGAAGAAGGCCGTTATGTCGCTGCACCGGTTTTACCTGAAATCTCCGTCCTCCGTTTCGCATTTGCTTTCCAATTTCCGTAAGCGGTTGTGCGATAATGATCCCGGAGTAATGGGCGCTTCTCTGTGCCCGCTTTTTAATCTCGTTTCCGATGATGTTCACTCTTATAAGGACCTTGTCGTTAGCTTTGTTAATATTCTTAAGCAAGTTGCAGAGCATAGGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCTTTCATTCAGATTAAGTTGCTGAAAATACTTGCATTACTGGGAAGTGGGGACAAGCAGGCTAGTGGACACATGTACACTGTGCTTGAGGATATAATTAGGAGGAGTGATTCAATGACGAACATAGGGAATGCTGTTCTCTATCAGTGCATATGCTGTGTGGCTTCTATATATCCCAATCCTAAGTTGTTAGAGGCTGCTGCGGATGTAATTGCGAAATTTTTGAAGAGTGACAGTCATAATCTGAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAACAACACCAACTGGCCGTCATTGACTGCTTGGAGGACCCAGATGATAGTCTGAAACGAAAAACTTTCGAACTGTTATACAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCATTATAAAACTTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCACATAATTTGATGCGGTTGATTGCTGAAGGATTTGGAGAGGACGATGATGCTGCAGATAGTCAGTTGAGATCATCTGCTGCCGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCAGTGTTTCTTCAAGTCATCTGTTGGGTTCTGGGGGAATACGGAACAGCAGATGGAAAGTATTCTGCTTCTTATATCAGTGGGAAGTTATGTGACATTGCAGAGGCATATTCCAATGATGAAAATGTTAAGGCTTATGCAATTTCAGCACTGTTGAAAATTTATGCATTTGAAGTAGCAGCTGGGAGGAAAGTGGATATCCTATCTGAGTGCCAATCGTTGATTGAAGAATCATTGGCATCACACTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCTCTTATAGGTTTGGATGTACAAGCTGTTGAAACAATAATGCCACGAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGAATCTTTCTTTCCTCAATGGGTATGTTCAGCAGTCTTTAGAAAGGGGTGCTAAATCCTATATTCCTGAGGATGTGCGCACTGGAATGGGGAATATGAACAATTTCAGAAGCCAAGATCATCATGAAACTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCGAAGGCTCCAATGCAACCAAAAGTTACTCCAGTTTCATTTGCATCCTCAGCAGACATTGTTCCAGTACCCGAGGTTTTGTCTTCCAGGGAGACCCACCATATCTCATCAGTGGGATCAACATCTGAGGCTGGATCATCAGAGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAATGGGGTAAACCAATGTATTCGTCTTCAACATCATCTGCCTCTGTCTCGTATTCTACTTCCCAAAAACCAACGAATGGGGCAACTCAGGTGGATGGTGCTACAACTGTCAATTCAAAAGTGCGTGATAGTTATGATTCAAGAAAGACACAGGTTGAGATTACTCCAGAAAAGCAAAAGCTTGCTGCTTCTTTGTTTGGTGGTTCAACTAAACCTGAGAAAAGATCATCTACAAGTCATAAGGTTTCAAAATCTAGTGCTAGTGCTGCAGACGGATCTCAGGGATCAAAGGCTGCGGTTGTACCCAATGACGTAGCTGTGGAAAAAACAATTCATCAACCACCTCCTCCTGATTTGCTTGACTTGGGTGAGCCAACTGTCACTACAGCTCCTCCTTATGTGGACCCATTCAAGGAATTGGAAGGACTTCTTGACCCAAGCACTAAGTCTGCAACAAATCATAATGTAGCTGCTGCTACAAATGCCCCTGATATTATGTCACTCTATGCCGAGACTACTGCCAGTGGTGGTTATTCTATACCCGTGAGTGGGGGGTATGATGTAAATCTTTTATCTGAATTGTCAAATGCAGCTGCAAAAGCTACTAGTGGAGAAACAATTGTGACGTCTTTGCCACAATCTATTATGGGTCGAAATGCTAAAGATTCTTTGGAGAAGGATGCTTTAGTGAGGCAGATGGGTGTGAATCCCTCGAGTCAGAATCCTAACTTGTTCAGTGACTTGCTTGGCTAA 2901 0.4436 MGSHHGHSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRLLNDADTPKRKIKEYIIRLLYVEMLGHDASFGYIHAVKMTHHDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVDLLNHSKDAVRKKAVMSLHRFYLKSPSSVSHLLSNFRKRLCDNDPGVMGASLCPLFNLVSDDVHSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKLLKILALLGSGDKQASGHMYTVLEDIIRRSDSMTNIGNAVLYQCICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAAESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISALLKIYAFEVAAGRKVDILSECQSLIEESLASHSTDLQQRAYELQALIGLDVQAVETIMPRDASCEDIEVDKNLSFLNGYVQQSLERGAKSYIPEDVRTGMGNMNNFRSQDHHETLQHGLRFEAYEVPKAPMQPKVTPVSFASSADIVPVPEVLSSRETHHISSVGSTSEAGSSELKLRLDGVQKKWGKPMYSSSTSSASVSYSTSQKPTNGATQVDGATTVNSKVRDSYDSRKTQVEITPEKQKLAASLFGGSTKPEKRSSTSHKVSKSSASAADGSQGSKAAVVPNDVAVEKTIHQPPPPDLLDLGEPTVTTAPPYVDPFKELEGLLDPSTKSATNHNVAAATNAPDIMSLYAETTASGGYSIPVSGGYDVNLLSELSNAAAKATSGETIVTSLPQSIMGRNAKDSLEKDALVRQMGVNPSSQNPNLFSDLLG 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01573 966 MobiDBLite consensus disorder prediction 688 707 - -
Gma01g01573 966 PIRSF AP4_epsilon 1 696 IPR017109 GO:0015031|GO:0030124
Gma01g01573 966 PIRSF AP4_epsilon 685 829 IPR017109 GO:0015031|GO:0030124
Gma01g01573 966 PIRSF AP4_epsilon 879 966 IPR017109 GO:0015031|GO:0030124
Gma01g01573 966 Pfam Adaptin N terminal region 36 579 IPR002553 GO:0006886|GO:0016192|GO:0030117
Gma01g01573 966 Gene3D - 2 592 IPR011989 -
Gma01g01573 966 MobiDBLite consensus disorder prediction 688 705 - -
Gma01g01573 966 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 5 962 - -
Gma01g01573 966 MobiDBLite consensus disorder prediction 718 814 - -
Gma01g01573 966 MobiDBLite consensus disorder prediction 720 757 - -
Gma01g01573 966 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 5 962 - -
Gma01g01573 966 SUPERFAMILY ARM repeat 25 623 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01573 Gma-Chr1 51277350 51285824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01573 K12400 - gmx:100819573 1832.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01573 01 51277350 51285824 Gma01g01573 01 51277350 51285824 ECH
Gma01g01573 01 51277350 51285824 Gma09g02031 09 45888792 45896942 GST