Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02030 ATGGCGACTGTATCCTGCGCGAACCTGGAATCCTTCATTGGTTGCTTCATATGCTTGATTTCCAAGTGCGAGATTCGCTACGAGGGCGTTCTCTATTTCTTCAACATTCAAGATTCCATCATCGGCTTGAAGGACGTTAGATCCTATGGAACAGAGGGGAGAAGAAAAGATGGTCCACAAGTTCCTCCAAGTTATATGGTTTATGAATACATTCTTTTCCGAGGAAATAATATTAAGAATTTGCAGATCAAGTTCCCCGCCCCATCTTCCAAATTAGAAGAGCAGGTTTTTAGTGATCCAGCTATTATTCAGTCGGAATATTCtgggttgctaagttctccagtggttgggttgctaagttctccagtggCCTCAGTTGGTGGTAGAAGTTTGACAGAATCAATTCAAAGGCAAGATAGCCCTGCAATATCCAGTAAAGCCTTTCCTGCTGGGTTGCCTTCTCATCAGTCTGTAACTCAGCCGGGACCTTCAAATTCATCTGCTGCTACTCAAGTTGCTAGTCATCCATCTTTTTTTGCAGCAATGGATTGGCAAGGACCCAGTCGGATATCTAGCAGTAGTTCTCATTCTCTGCTACAATCTAGTTCTCGTCAACCCCCATCACTGGCAGCATCCTTAGCTGTGCAGAATCAGATGCAAAATGCAGAAACTCAGGTACCTATAAAAGGGGGATGGACAGCTTTATCAGACTATGGTCTACCTGTATCTTCTGCCATGGCTTCTCTCGTAAATCAGACTCATCCACCTTCTCTTACCTCTTTAAAAAATTCTGATTCTCTTGATATTCCATCCCTTTTGTCTACTAAGCCACCTGTATCATATTCTGCATCCATGACTTTTGATGGATCAAACATGCCTCAGTTTTCTTCAACGCTCCAAGACATAAATTCTATTCAAGCTCAAATATCTGGAAACATTTGTCCTGACCCAAGGTCAATTCATCCTCAACATTCTGTCCATCGTTCAGCTCCTTCATTTGTTGATTCTACTTCAGGTTCCTTGCCAACAGCACCATCTTTATTAACCCCAGATCAATTTGCTTATCCTAGAGAACAGTTATTGTCTTTAACTCATTTGAATCCTACTCAGAAGGATATGGGTTCTCTGACTCTAACATCCTCTGGTTCCTCTGCATTAATGCCTTCTCCAGCATCTCAGGCACCACTGCTTCCACTACCAACTTCAGTGCAAAAGggagtggataatgcttctctcccagctctacaatacactgaagagtttgatattgaggccatcaatgaaaagttcaaaaaaaatgtagtatggggttcttttggaaaggcaatcacaaaaatagagggagtggaggataatgcttctctTAGTTTGGGTGACAGAGAATGTCCTGGGGTGATACCGAACCCTAAGACTGGATACAAGAAAGATGACTTTTTTGATACAATTTCTTGCAACTCTTCGACTGGTGGATCAAGGAGTGGACCAAATCTTTTCTCTGAGAGAATGAAACAGGATACTGAGACATCTGACAGTTTCCAGCAGAGGCCTAATTTTACTTCTGGTGCTGGACGGGGTGCGGATTTCAGGGGCGCAAATAATTGGGGAAGGGGTTATGGCTACAATAGGAGAGGGCGTGGTCCAAACTTTCCTTTTTAG 1656 0.3798 MATVSCANLESFIGCFICLISKCEIRYEGVLYFFNIQDSIIGLKDVRSYGTEGRRKDGPQVPPSYMVYEYILFRGNNIKNLQIKFPAPSSKLEEQVFSDPAIIQSEYSGLLSSPVVGLLSSPVASVGGRSLTESIQRQDSPAISSKAFPAGLPSHQSVTQPGPSNSSAATQVASHPSFFAAMDWQGPSRISSSSSHSLLQSSSRQPPSLAASLAVQNQMQNAETQVPIKGGWTALSDYGLPVSSAMASLVNQTHPPSLTSLKNSDSLDIPSLLSTKPPVSYSASMTFDGSNMPQFSSTLQDINSIQAQISGNICPDPRSIHPQHSVHRSAPSFVDSTSGSLPTAPSLLTPDQFAYPREQLLSLTHLNPTQKDMGSLTLTSSGSSALMPSPASQAPLLPLPTSVQKGVDNASLPALQYTEEFDIEAINEKFKKNVVWGSFGKAITKIEGVEDNASLSLGDRECPGVIPNPKTGYKKDDFFDTISCNSSTGGSRSGPNLFSERMKQDTETSDSFQQRPNFTSGAGRGADFRGANNWGRGYGYNRRGRGPNFPF 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02030 551 SUPERFAMILY Sm-like ribonucleoproteins 11 83 IPR010920 -
Gma09g02030 551 MobiDBLite consensus disorder prediction 150 172 - -
Gma09g02030 551 MobiDBLite consensus disorder prediction 130 172 - -
Gma09g02030 551 PANTHER SCD6 PROTEIN-RELATED 7 547 - -
Gma09g02030 551 CDD LSm14_N 10 83 IPR025609 -
Gma09g02030 551 Gene3D - 3 86 - -
Gma09g02030 551 Pfam FDF domain 416 510 IPR019050 -
Gma09g02030 551 SMART FDF_2 415 513 IPR019050 -
Gma09g02030 551 Pfam Scd6-like Sm domain 12 83 IPR025609 -
Gma09g02030 551 MobiDBLite consensus disorder prediction 325 347 - -
Gma09g02030 551 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 7 547 - -
Gma09g02030 551 MobiDBLite consensus disorder prediction 485 551 - -
Gma09g02030 551 MobiDBLite consensus disorder prediction 322 349 - -
Gma09g02030 551 MobiDBLite consensus disorder prediction 485 502 - -
Gma09g02030 551 SMART LSM14_2 8 107 IPR025609 -
Gma09g02030 551 ProSiteProfiles FFD box profile. 471 486 IPR025761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02030 Gma-Chr9 45877349 45883406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02030 K18749 - gmx:102669894 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02030 09 45877349 45883406 Gma09g02030 09 45877349 45883406 ECH
Gma01g01572 01 51265556 51272090 Gma09g02030 09 45877349 45883406 GST