Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02002 ATGACGCGGGGAAAGCAGAAGATCGAAGCGCAGAAGCGAAACGCAGAGAGGAATCAGAAGGGAAAGGGCTCTCAGCTCGAGGCCAGAGCCGTTGGCCTCAAAGTCATCTGCCCCATCTGCAAGGCCCAACTTGCAAATCAAAACCAACTTGTTGATCATTATGCTTCCAAACATCCGAAGGAGAAACCCCCTGCAGAGACCAGTTAG 207 0.5217 MTRGKQKIEAQKRNAERNQKGKGSQLEARAVGLKVICPICKAQLANQNQLVDHYASKHPKEKPPAETS 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02002 68 PANTHER GEO09665P1-RELATED 1 67 IPR045230 -
Gma09g02002 68 Gene3D - 1 67 IPR026939 -
Gma09g02002 68 MobiDBLite consensus disorder prediction 1 26 - -
Gma09g02002 68 Pfam Zinc-finger of C2H2 type 37 57 - -
Gma09g02002 68 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 63 IPR013087 -
Gma09g02002 68 SUPERFAMILY Expressed protein At2g23090/F21P24.15 1 65 - -
Gma09g02002 68 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Gma09g02002 68 MobiDBLite consensus disorder prediction 1 23 - -
Gma09g02002 68 PANTHER GEO09665P1-RELATED 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02002 Gma-Chr9 45640227 45642895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02002 - - gmx:100306387 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02002 09 45640227 45642895 Gma09g02002 09 45640227 45642895 ECH
Gma01g01549 01 50997906 51001610 Gma09g02002 09 45640227 45642895 GST