Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01549 ATGACGCGGGGAAAGCAGAAGATCGAAGCGCAGAAGCGAAACGCAGAGAGGAATCAGAAGGGAAAGGGCTCTCAGCTCGAGGCCAGAGCCGTTGGCCTCAAAGTCATCTGCCCCATCTGCAAGGCCCAACTTGCAAATCAAAACCAACTGGTTGATCATTATGCTTCCAAACATCCGAAGGAGAAACCTCCTGCAGAGTCAAGCTAG 207 0.5217 MTRGKQKIEAQKRNAERNQKGKGSQLEARAVGLKVICPICKAQLANQNQLVDHYASKHPKEKPPAESS 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01549 68 PANTHER GEO09665P1-RELATED 1 66 - -
Gma01g01549 68 Gene3D - 1 66 IPR026939 -
Gma01g01549 68 Pfam Zinc-finger of C2H2 type 37 57 - -
Gma01g01549 68 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 63 IPR013087 -
Gma01g01549 68 PANTHER GEO09665P1-RELATED 1 66 IPR045230 -
Gma01g01549 68 MobiDBLite consensus disorder prediction 1 27 - -
Gma01g01549 68 SUPERFAMILY Expressed protein At2g23090/F21P24.15 1 65 - -
Gma01g01549 68 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Gma01g01549 68 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01549 Gma-Chr1 50997906 51001610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01549 - - gmx:100500226 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01549 01 50997906 51001610 Gma01g01549 01 50997906 51001610 ECH
Gma01g01549 01 50997906 51001610 Gma09g02002 09 45640227 45642895 GST