Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01946 ATGCAGAAATTGGGAGAGTTTAaattaccacctttcttcaattacccaccttacttcaCTTTGCAGCCAGTCAGAGACACAAGAGAGAAGCAGATACAGCTATGGAAAGATCTTATTTTAGATTTTTGTAAAACACAGAAGATATTTATAATTGGGCTTGAAGAAGAATTTCCACTATTTACAAATCATGGAATTGAAAGGTCTCTTACTCATGAAGCCAGAGAAGCTTTCCTTTCAGCATTAGTGTCTGAAGGGCGTGCAGAATGGATGGATAAAGGACATAGGAAATGTCTTATTCTCTGGCATCGGATTCAAGATTGGGCTGATATTTTAATACAGTTTGCAAAAGATAATGGGCTGGAAGATGGTGTTGTCACAATAGAAGAAATACGATCAGGCACTGAATCTCAAGGAACAGATCTTCATGGAATAGATCGAACTATTTTGAATCGAGCACTGAAACTATTAGAACAGAAGGGAAAGCTTGTGGTCTTTAAAGGAACTTCAACTGATGATGAAGGAGTTAAATTTTCTTTATAA 540 0.3426 MQKLGEFKLPPFFNYPPYFTLQPVRDTREKQIQLWKDLILDFCKTQKIFIIGLEEEFPLFTNHGIERSLTHEAREAFLSALVSEGRAEWMDKGHRKCLILWHRIQDWADILIQFAKDNGLEDGVVTIEEIRSGTESQGTDLHGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGVKFSL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01946 179 Pfam ESCRT-II complex subunit 13 145 IPR008570 GO:0000814|GO:0071985
Gma09g01946 179 Gene3D - 4 100 IPR014041 -
Gma09g01946 179 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Gma09g01946 179 SUPERFAMILY "Winged helix" DNA-binding domain 102 177 IPR036390 -
Gma09g01946 179 Gene3D - 101 178 IPR036388 -
Gma09g01946 179 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 2 178 IPR008570 GO:0000814|GO:0071985
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01946 Gma-Chr9 45111184 45114494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01946 K12189 - gmx:100803388 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01946 09 45111184 45114494 Gma09g01946 09 45111184 45114494 ECH
Gma01g00106 01 1120773 1123248 Gma09g01946 09 45111184 45114494 GST