Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00106 ATGCAGAAATTGGGAGGGTTCAAACTACCACCTTTCTTCAATTACCCACCTTATTTCACTTTGCAGCCAGTAAGAGACACGAGAGAGAAGCAGATACAACTATGGAAAGATCTAATTTTAGATTTTTGTAAAACACAGAAGATATTTGTAATTGGGCTTGAAGAAGAATTTCCTCTATTTACAAATCATGGAATTGAAAGGTCTCTTACTCATGAAGCCAGAGAAGCTTTCCTTTCTGCATTAGTGTCTGAAGGTGTGTGTTTCATTCATGTCAATGGATTTATAATTCTTGTATTTGGCTCAGAAAAATGCCTCATGTGTAATTTGACAGGACGTGCAGAATGGATGGATAAAGGACATAGGAAATGTCTTATTCTCTGGTATCGGCTTCAAGATTGGGCTGACATTTTAATACAGTTTGCAAAAAATAATGGGCTGGAAGATGGTGTTGTCACAGTAGAAGAAATACGAACAGGGACCGAATCTCAAGGAACAGATCTTCATGGAATAGATCGAACTATTTTGAATCGTGCACTGAAACTATTAGAACAGAAGGGAAAACTTGTGGTCTTTAAAGGAACTTCAACTGATGATGAAGGAGTTAAATTTTCTATATAA 618 0.3657 MQKLGGFKLPPFFNYPPYFTLQPVRDTREKQIQLWKDLILDFCKTQKIFVIGLEEEFPLFTNHGIERSLTHEAREAFLSALVSEGVCFIHVNGFIILVFGSEKCLMCNLTGRAEWMDKGHRKCLILWYRLQDWADILIQFAKNNGLEDGVVTVEEIRTGTESQGTDLHGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGVKFSI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00106 205 Gene3D - 129 204 IPR036388 -
Gma01g00106 205 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 2 204 IPR008570 GO:0000814|GO:0071985
Gma01g00106 205 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 25 2 204 - -
Gma01g00106 205 SUPERFAMILY "Winged helix" DNA-binding domain 7 89 IPR036390 -
Gma01g00106 205 Gene3D - 5 97 IPR014041 -
Gma01g00106 205 SUPERFAMILY "Winged helix" DNA-binding domain 129 203 IPR036390 -
Gma01g00106 205 Pfam ESCRT-II complex subunit 13 171 IPR008570 GO:0000814|GO:0071985
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00106 Gma-Chr1 1120773 1123248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00106 K12189 - gmx:100798066 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00106 01 1120773 1123248 Gma01g00106 01 1120773 1123248 ECH
Gma01g00106 01 1120773 1123248 Gma09g01946 09 45111184 45114494 GST