Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01921 ATGACGATAAAAACTGTTAAAGTCAGTAACGTTTCCTTGGGAGCAACTGAACAAGACATTAAGGAGTTCTTTTCATTTTCTGGTGATATTGAATATGTTGAACTACAGAGCCATGATGAACGATCTCAAATTGCTTTTATTACCTTCAAGGATTCACAGGGAGCTGAGACTGCAGTACTGCTTTCGGGAGCAACAATAGTCGATATGCCAGTTACAATATCTCTGGATCCAGATTACCAGCTTCCACCTGCTGCCTTAGCATCACCTGTAAGAGAAACTCGAACTCCTGGTGGCGGTGCTGACTCTGCTTTCCGGAAGGCAGAGGATGTGGTCTCCGGCATGCTAGCCAAGGGCTTTATCTTAGGGAAAGATGCTGTCAACAAAGCAAAGACCTTTGACGAGAAGCACCAGTTATCCTCCACAGCCTCAGCAAAAGTTGCGTCTTTCGATCAGAAAATTGGGCTTAGCGAGAAAATAAGTGCTGGTGCTACAGTAGTGGGTGATAGAGTTCGAGAAGTGGACCAAAAGTTTCAGGTTTCAGAGAAGACCAAATCAGCATTTGCAGCTGCAGAACAGACAGTGAGTAATGCTGGTTCTGCCATAATGAAGAATCGCTATGTGCTTACCGGGGCATCCTGGGTAACAGGTGCTTTTAGTAAGGTTTCTAAGGCGGCTGGTGAAGTAGGACAGAAGACGAAAGAGAAAGTGGAGAGTGCAGAAGAACAACAGAAACGAAAAGTGGAAGATCAATATGCACAAGTCCTTTCTGAGTCCCCAAAAGCAGCAGAAGCAAGTGAGCAGAAATCTTCCAAGCCTGCTCCTGCCCAGGGTTTGATCCTTTGA 843 0.4543 MTIKTVKVSNVSLGATEQDIKEFFSFSGDIEYVELQSHDERSQIAFITFKDSQGAETAVLLSGATIVDMPVTISLDPDYQLPPAALASPVRETRTPGGGADSAFRKAEDVVSGMLAKGFILGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGLSEKISAGATVVGDRVREVDQKFQVSEKTKSAFAAAEQTVSNAGSAIMKNRYVLTGASWVTGAFSKVSKAAGEVGQKTKEKVESAEEQQKRKVEDQYAQVLSESPKAAEASEQKSSKPAPAQGLIL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01921 280 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 266 - -
Gma09g01921 280 Gene3D - 2 74 IPR012677 -
Gma09g01921 280 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Gma09g01921 280 SMART rrm1_1 5 74 IPR000504 GO:0003723
Gma09g01921 280 MobiDBLite consensus disorder prediction 229 251 - -
Gma09g01921 280 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Gma09g01921 280 PANTHER BINDING PARTNER OF ACD11 1 1 266 - -
Gma09g01921 280 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 66 IPR000504 GO:0003723
Gma09g01921 280 MobiDBLite consensus disorder prediction 229 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01921 Gma-Chr9 44827530 44831427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01921 - - gmx:100797009 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01921 09 44827530 44831427 Gma09g01921 09 44827530 44831427 ECH
Gma01g00138 01 1541194 1544707 Gma09g01921 09 44827530 44831427 GST