Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01906 ATGGCAATGAGCAACAATGTGATCGGATGCATAAACTTCGTGGCGGTGATCCTCTCAATCCCAATCATCGGCGCCGGAATCTGGCTTTTAAACGGGGAAGCCGATTCCTGCGTCCAGTTCCTGCAATGGCCCGTCATCATCCTCGGAGTCCTCATCCTCGTCGTGGCCCTCGCAGGTTTCATCGGAGCCTTCTTCAGAGTCTCGTGGCTCCTCATCGTCTACCTCGTTGCCATGCTCGTCCTCGTCATACTCTTAGTGTCTTTGGTCGCTTTTGTTTACATGGTTACTCTTCGGGGACACGGCAACATTGAGCCCAACCGCGCTTACTTGGAGTACCGCATGGATGACTTTTCTGGCTACCTTCGTCGTAGGGTTAGAAGCTCGTTCAAGTGGGACCGCATCAGAAGCTGTCTTAGCCAAACCAACATGTGTGCTGAGCTTAACCAGGGTTATCGAATGGCTCAGGACTTCTTCAACGCGCGTCTAACGCCCATGCAGTCAGGGTGCTGCAAGCCACCAACGCAATGTGCGTACACGTTTGTGAATCCAACCTATTGGATTAGTCCCATCAACACAGCAGCGGATATGGATTGCCTGCAATGGAGCAACGACCAAACACAACTTTGCTACAACTGTGACTCGTGCAAGGCAGGTTTATTGGCAAATCTTAGGAAGGAGTGGAGAAGGGCCAATGTGATATTAATCATCACAGTCATTGTTTTAATAATTGTGTATTTGGTAGGGTGTTGTGCCTTTAGGAATGCCAAAACGGAGGACCTCTTCCGCAAATACAAACAAGGCTACACTTGA 810 0.4988 MAMSNNVIGCINFVAVILSIPIIGAGIWLLNGEADSCVQFLQWPVIILGVLILVVALAGFIGAFFRVSWLLIVYLVAMLVLVILLVSLVAFVYMVTLRGHGNIEPNRAYLEYRMDDFSGYLRRRVRSSFKWDRIRSCLSQTNMCAELNQGYRMAQDFFNARLTPMQSGCCKPPTQCAYTFVNPTYWISPINTAADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWRRANVILIITVIVLIIVYLVGCCAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01906 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Gma09g01906 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016021
Gma09g01906 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Gma09g01906 269 PRINTS Transmembrane four family signature 6 29 - -
Gma09g01906 269 PRINTS Transmembrane four family signature 38 64 - -
Gma09g01906 269 PRINTS Transmembrane four family signature 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01906 Gma-Chr9 44680651 44683234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01906 1 269 Miscellaneous Gene Families AT5G46700 70.260 1.38e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01906 - - gmx:100791755 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01906 09 44680651 44683234 Gma09g01906 09 44680651 44683234 ECH
Gma01g00157 01 1693788 1694285 Gma09g01906 09 44680651 44683234 GST