Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00157 ATGGCAATGAGCAACAATGTGATCGGATGCATAAACTTCGTGGCCGTGATCCTCTCAATCCCGATCATCGGCGCCGGAATCTGGCTAACAAACGGGGATGCCGATTCATGCGTCCAGTTCCTGCAATGGCCCGTCATCATCCTCGGAGTCCTCATCCTCGTCGTGGCCCTTGCAGGTTTCATCGGAGCCTTCTTCAGAGTCTCGTGGCTCCTCATCGTTTACCTCGTTGCCATGCTCGTCCTCGTCATACTCTTAGTGTCTTTGGTCGCTTTTGTTTACATGGTCACGCTTCGGGGACACGGCAACATCGAACCTAACCGCGCTTACTTGGAGTACCGCATGGATGATTTTTCTGGCTACCTTCGTCGTAGGGTTAGAAGCTCGTTCAAGTGGGACCGCATCAGAAGCTGTCTTAGCCAAACCAACATGTGCGCTGAGCTTAACCAGAGTTATAGAATGGCTCAGGACTTCTTCAACGCTCGTCTAACGCCCATGCAG 498 0.5241 MAMSNNVIGCINFVAVILSIPIIGAGIWLTNGDADSCVQFLQWPVIILGVLILVVALAGFIGAFFRVSWLLIVYLVAMLVLVILLVSLVAFVYMVTLRGHGNIEPNRAYLEYRMDDFSGYLRRRVRSSFKWDRIRSCLSQTNMCAELNQSYRMAQDFFNARLTPMQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00157 166 PRINTS Transmembrane four family signature 6 29 - -
Gma01g00157 166 PRINTS Transmembrane four family signature 38 64 - -
Gma01g00157 166 PRINTS Transmembrane four family signature 65 93 - -
Gma01g00157 166 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 166 - -
Gma01g00157 166 Pfam Tetraspanin family 6 138 IPR018499 GO:0016021
Gma01g00157 166 PANTHER TETRASPANIN-8-RELATED 1 166 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00157 Gma-Chr1 1693788 1694285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00157 1 166 Miscellaneous Gene Families AT5G46700 68.675 5.64e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00157 - - gmx:100795775 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00157 01 1693788 1694285 Gma09g01906 09 44680651 44683234 GST