Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01719 ATGATGGGTTCGACGGCGAGGGTGCCGAAGCTGGGTTCTTTCCGCCACAGCTTCGCGGAGAGGAAGGAGAGACTGCTCTCAATGAAGGGCGGCATCGGCGGCGGCTACTCCCAAATTGGGATCCCGCTGCCGGAGTCCGACGAGGAGGATCACTCTCCGACGCGGAGGCGCTGCTGCTCCTACCGCGCCGTCTCGGACGGGATCGTCGGCGCGTGGAAGAGCGCGAAGCGCGTGGCTGCGAGGGCGTGGGAGATGGGTCGCTCCGATCCAAGGAAGATCATATTCTCCGCGAAAATGGGACTCGCTCTGATTCTCCTTTCGCTTTTGATTTTTCTGAAACAGCCCTTTGAGGACATTGCTAAACACTCCGTTTGGGCCATTCTCACTGTCGTTGTGGTCTTCGAATTCAGCATAGGGGCAACTCTTAGCAAAGGGCTTAACAGAGGATTGGGGACTTTGTTAGCTGGAGGACTAGCATTGGGAATGGGACTTTTATCAAAATTGTCTGGAAAATGGGAAGAAACCATTATAGTTGTTAGCATCTTCACTGCAGGGTTTTGTGCCACATATGCAAAGCAATATCCAACAATGAAGGCTTATGAATATGGTTTTCGTGTGTTCTTGATCACCTATTGCTACATTATTGTATCAGGGTATCATACAGGAGAGTTTGTTGAAACAGCTGTAGATAGATTTTTGCTCATTGCATTGGGCGCTGCTGTGGCTCTGGGGATAAATGTATGTATATATCCAATCTGGGCTGGTGAGGATCTACACAAGCTTGTGGCGAAAAATTTTGTGGGCGTTGCAGCATCATTGGAAGGTTgtgttgtaaataactatcttaattgtattgaatatgagagagtgccttcaaaaattctcacgtaccaagcttctgaggacgtggtttacaaaggttacagatcagctgttgaatctacaagcacagaggattcattgATGGGTTTTGCTGTCTGGGAGCCACCTCATGGTCCATACAAAATGCTTAGATATCCATGGCAAAATTATGTGAAAGTAAGTGGGGCACTAAGGCATTGTGCGTTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCTCCACCTGAGAAGAGGCAAGTCTTTAGTAGGGAGGTTCAAAAGGTAGGTTCTGAAGCGGCCAAAATTCTACGGGAACTTGGGAACAAAGTAAAAAAGATGGAGAAACTAGGCCAAGAAGACATTCTTTATGAAGTTCACGAGGCAGCAGAAGAATTGCAACAGAAGATTGACAAAAAATCCTTCCTCCTTGTAAATTCAGAGAGTTGGGAAATCGGAAACCGTCCCAGAGAGGAGGGTGATCCTCAAGACCTCTTGAACATGAATGAAGAAAGACACTTTTTGGAGTACAAGTCTCTCAGTGAAGCTGTGCTTGATCTCAGAGCTGTCAAAGTTCCAAGAAGTTGGGGAGAACAAACAACTCCTGACAACAAACCTGCAGCACCTATAGGTGTTGGTGATGAAAACATGTTCAAGAAACAGATATCATGGCCTGCTCATATTTCATTTAAAGCAGATGCAGTGACAAGAGAGGAAGAATCTAAAACCTATGAAAGTGCTAGTTCACTGTCTCTAGCAACATTTACATCCCTTCTGATTGAGTTTGTGGCAAGGCTTCAGAACCTTGTCGATTCTTTTGAAGAGTTAGGTGAGAAAGCAAAATTTAAGGACCCTCTTGAGCACGTACCACCAACATCTGGTGGGTTTTGGAACAGGCAAAATTATAAAACCATTTTTTTTCTCTCTCTGTCCAAACGGCAGATCAGATCCATTCTTCAACAAATCCCCTTTTCAGTTTCAGTTTTTCTCGAGGATCCCGTGAAACGACATGGCGATGGTGGACCAGCCTCTCTGCGCCTCAACTCGATCCGAAGGCTCTCCACGATCGCGCGCGCGCTCGGCGAGGACCGCACGCGGAAGGAGCTGATTCCGTTCCTCAGCGAGAACAACGACGATGACGACGAAGTGCTCCTCGCAATGGCCGAGGAATTAGGTGTCTTCATTCCCTACGTCGGAGGCGTTGAGCACGCCAACGTGCTTCTTCCTCCCTTGGAGACGCTCTGCACCGTTGAGGAAACCAGCGTCAGAGACAAGTCGGTGGAGTCGCTGTGCAGAATTGGAGCTCAGATGAGAGAGCAAGACTTGGTTGAATACTTGATTCCTTTAGTTAAGAGGCTGGCTGCTGGTGAGTGGTTCACGGCACGGGTTTCATCGTGTGGTTTGTTCCATATTGCTTACCCTAGTGCACCCGAGGCGGTGAAGACTGAACTGAGAGCCATATATGGGCAGCTGTGTCAGGATGATATGCCCATGGTTAGGAGATCTGCGGCCACAAACTTGGGAAAGTTTGCCGCTACTGTTGAAGCTCCTCACTTGAAATCTGACATCATGTCTGTGTTTGAGGATCTCACACATGATGATCAAGATTCTGTTCGGCTACTTGCTGTTGAGGGTTGTGCAGCTCTGGGGAAATTGTTGGAACCTCAAGATTGCGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgataagtcatggcgtgttcgttacatggttgctaatcaactatatgagctatgtgaagctgttggtcctgaccccaccagatcagaattggtccctgcatatgttcgtctgctgcgtgataatgaggctgaagtacgtattgctgctgctgggaaagtaactaagttttcccgcatattaaatcccgatcttgcgattcagcatattctaccATGTGTGAAGGAGTTATCAACTGATTCTTCTCAACATGTTCGCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGGATGCCACAATCGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGACGAGTTTCCTGATGTCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTATTGGTATTGATTTGTTATCTCAGTCTCTGTTGCCAGCCATAGTAGAACTAGCTGAGGATCGGCACTGGAGAGTTCGACTTGCAATCATAGAATATATACCCTTATTGGCAAGCCAGTTGGGTGTTAGTTTTTTTGATGATAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTATACTCAATCCGTGATGCGGCTGCTAATAACATCAAACGCTTGGCAGAAGAATTTGGACCGGATTGGGCAATGCAGCACATTATTCCCCAGGTTTTGGACATGGTTACTGATCCACATTATCTGTATCGAATGACAATCTTACAATCAATTTCTCTACTAGCTCCTGTTCTGGGCTCAGAGATTTCTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAAGATAGGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCTGTTGTTGAGAGTACCATTCGTCCCTGTTTGGTTGAGCTCAGTGAGGATCCAGATGTTGATGTTAGGTTTTTCGCCTCACAAGCACTACAATCTTGTGATCAAGTCAAGATGTCTAGCTAG 3594 0.4204 MMGSTARVPKLGSFRHSFAERKERLLSMKGGIGGGYSQIGIPLPESDEEDHSPTRRRCCSYRAVSDGIVGAWKSAKRVAARAWEMGRSDPRKIIFSAKMGLALILLSLLIFLKQPFEDIAKHSVWAILTVVVVFEFSIGATLSKGLNRGLGTLLAGGLALGMGLLSKLSGKWEETIIVVSIFTAGFCATYAKQYPTMKAYEYGFRVFLITYCYIIVSGYHTGEFVETAVDRFLLIALGAAVALGINVCIYPIWAGEDLHKLVAKNFVGVAASLEGCVVNNYLNCIEYERVPSKILTYQASEDVVYKGYRSAVESTSTEDSLMGFAVWEPPHGPYKMLRYPWQNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFSREVQKVGSEAAKILRELGNKVKKMEKLGQEDILYEVHEAAEELQQKIDKKSFLLVNSESWEIGNRPREEGDPQDLLNMNEERHFLEYKSLSEAVLDLRAVKVPRSWGEQTTPDNKPAAPIGVGDENMFKKQISWPAHISFKADAVTREEESKTYESASSLSLATFTSLLIEFVARLQNLVDSFEELGEKAKFKDPLEHVPPTSGGFWNRQNYKTIFFLSLSKRQIRSILQQIPFSVSVFLEDPVKRHGDGGPASLRLNSIRRLSTIARALGEDRTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETSVRDKSVESLCRIGAQMREQDLVEYLIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEAVKTELRAIYGQLCQDDMPMVRRSAATNLGKFAATVEAPHLKSDIMSVFEDLTHDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDPTRSELVPAYVRLLRDNEAEVRIAAAGKVTKFSRILNPDLAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVSFFDDKLGALCMQWLKDKVYSIRDAAANNIKRLAEEFGPDWAMQHIIPQVLDMVTDPHYLYRMTILQSISLLAPVLGSEISSSKLLPLVINASKDRVPNIKFNVAKVLQSLIPIVDQSVVESTIRPCLVELSEDPDVDVRFFASQALQSCDQVKMSS 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01719 1197 Pfam HEAT repeat 852 880 IPR000357 GO:0005515
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 852 890 IPR021133 -
Gma09g01719 1197 Pfam Aluminium activated malate transporter 83 567 IPR020966 GO:0015743
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 891 929 IPR021133 -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 774 812 IPR021133 -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 930 968 IPR021133 -
Gma09g01719 1197 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 634 1197 - -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 697 735 IPR021133 -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 813 851 IPR021133 -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 1008 1046 IPR021133 -
Gma09g01719 1197 Gene3D - 631 1190 IPR011989 -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 969 1007 IPR021133 -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 1125 1163 IPR021133 -
Gma09g01719 1197 Pfam HEAT repeats 971 1070 - -
Gma09g01719 1197 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 634 1197 - -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 1086 1124 IPR021133 -
Gma09g01719 1197 SUPERFAMILY ARM repeat 633 1188 IPR016024 -
Gma09g01719 1197 ProSiteProfiles HEAT repeat profile. 1164 1197 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01719 Gma-Chr9 42809807 42826467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01719 10 575 Miscellaneous Gene Families AT3G18440 62.564 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01719 K03456 - gmx:100810157 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01719 09 42809807 42826467 Gma09g01719 09 42809807 42826467 ECH
Gma07g00817 07 8732504 8739857 Gma09g01719 09 42809807 42826467 GST