Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00817 ATGGCCGAGGAATTAGGCGTCTTCATTCCCTACGTCGGAGGCGTCGACCACGCCAACGTGCTTCTTCCTCCCTTGGAGACTCTCTGCACCGTTGAGGAAACCTGCGTCAGAGACAAATCGGTGGAGTCGCTGTGCAGAATTGGAGCACAGATGAGGGAGCAAGACTTGGTTGAGCACTTCATTCCTTTAGTTAAGAGGCTGGCTGCTGGTGAGTGGTTCACGGCACGGGTTTCGTCGTGCGGTTTGTTCCATATTGCTTACCCCAGTGCACCAGAGTCGGTGAAGACTGAACTGAGAGCCATATATGGTCAGCTGTGTCAAGATGATATGCCCATGGTTAGGAGATCCGCTGCCACAAACCTGGGAAAGTTTGCCGCAACTGTTGAAGCTCCTCACTTGAAATCTGACATCATGTCTGTGTTTGAGGATCTCACACAGGATGATCAAGATTCTGTTCGGCTACTTGCTGTTGAGGGTTGTGCAGCTCTGGGAAAATTGTTGGAACCTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgataagtcatggcgtgttcgttacatggttgctaatcaactatatgagctatgtgaagctgttggtcctgaccccaccaggtcagaattggtccctgcatatgttcgtctgctgcgtgataatgaggctgaagtacgtattgctgctgctgggaaagtaactaagttttcccgcattttaaatcctgaccttgccattcagcatattctaccATGTGTGAAGGAGTTATCAACAGATTCATCTCAACATGTTCGCTCTGCACTGGCTTCTGTTATAATGGGTATGGCACCGGTGTTAGGGAAGGATGCTACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGACGAGTTTCCTGATGTCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTATTGGTATTGATTTGTTATCTCAGTCTCTGTTGCCAGCCATAGTAGAATTAGCTGAGGATCGGCACTGGAGAGTTCGACTTGCAATCATAGAATACATACCCTTATTGGCAAGCCAGTTGGGTGTTGGTTTTTTTGATGATAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTATACTCAATCCGTGATGCAGCCGCTAATAACATCAAACGCTTGGCAGAAGAATTTGGACCGGATTGGGCAATGCAGCACATTATTCCCCAGGTTTTGGACATGGTTACTGATCCACATTATCTGTATCGGATGACAATCTTACAAGCAATTTCTCTACTAGCTCCTGTTCTGGGCTCGGAGATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAGGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCT 1446 0.3907 MAEELGVFIPYVGGVDHANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQDLVEHFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPESVKTELRAIYGQLCQDDMPMVRRSAATNLGKFAATVEAPHLKSDIMSVFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDPTRSELVPAYVRLLRDNEAEVRIAAAGKVTKFSRILNPDLAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNIKRLAEEFGPDWAMQHIIPQVLDMVTDPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVINASKDRVPNIKFNVAKVLQSLIPIVDQS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00817 482 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 1 482 - -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 176 214 IPR021133 -
Gma07g00817 482 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 1 482 - -
Gma07g00817 482 SUPERFAMILY ARM repeat 4 480 IPR016024 -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 137 175 IPR021133 -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 215 253 IPR021133 -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 449 482 IPR021133 -
Gma07g00817 482 Gene3D - 1 482 IPR011989 -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 332 370 IPR021133 -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 254 292 IPR021133 -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 98 136 IPR021133 -
Gma07g00817 482 Pfam HEAT repeats 295 394 - -
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 293 331 IPR021133 -
Gma07g00817 482 Pfam HEAT repeat 176 204 IPR000357 GO:0005515
Gma07g00817 482 ProSiteProfiles HEAT repeat profile. 410 448 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00817 Gma-Chr7 8732504 8739857 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00817 K03456 - gmx:100799440 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00817 07 8732504 8739857 Gma07g00817 07 8732504 8739857 ECH
Gma07g00817 07 8732504 8739857 Gma09g01719 09 42809807 42826467 GST