Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00370 ATGCTTgtggcattgctcttgctggtggcattgAGCAATGCCGTTAGAGTTAATGGAGATGGAGGGCAATGTGGTTCCAACCCAACACTAGACCCTAGACCACACAGTGTCTCCATTTTGGAGTTTGGTGCAGTTGGAGATGGTAAAACACTCAACACCATTGCTTTCCAGAATGCCATCTTCTATCTCAAGTCATTTGCTGATAAGGGTGGGGCTCAGCTCTATGTTCCTCCGGGAAAATGGCTCACTGGAAGCTTCAATCTCACCAGCCATCTCACCCTCTTTTTGGAAAAAGGTGCTGTCCTTATTGGAACTCAGGATCCATCTCATTGGGATGTTGTTGAACCCTTGCCTTCTTATGGCCGAGGGCTTGAAGTTCCTGGGGGAAGATATCAGAGTTTGATAAATGGATACATGTTACATGATGTGGTCGTAACAGGTAATAATGGAACCATTGATGGCATGGGAATGGTTTGGTGGGATTGGTATAGCACCCATTCCTTGAACCACAGTCGTCCTCATTTGGTTGAATTTGTGGCATCTGATTATGTGGTAGTTTCAAATCTTACATTCTTGAATGCTCCAGCTTATAGCATACACCCAGTTTATTGCAGCCATGTACATATTCAAAATGTTTCAATCTCTACTCCTCCTGAATCCCCTTATACTGTTGGCATAGTGCCAGATTCTTCTGATAATGTGTGTATAGAAGATTGTATTGTTGCCATGGGATTTGATGCAATTTCTCTCAAAAGTGGCTGGGATGAGTATGGCATTGCTTATGGAAGGCCTACTGAGAATGTACACATCAGAAGGGTGCAACTTCATGCATTTTCTGGCTCTGCTCTTGCATTTGGCAGTGACATGTCTGGTGGCATTTCAAATGTTCTAGTGGAGCATGCTCATCTTTTCAACTCAAATAGTGGCATTGAGTTCAGAACCACCAAGGGAAGAGGTGGTTATATGAAAGAAATTGTTATGTCAGACATACAAATGGAGAATGTCCACACAGCAATTGCTGCCACAGGTAATTGTGGCTCTCATCCTGATGACAAGTTTGATCCAAATGCACTCCCACATTTGGATCACATTACCTTGAAGGATGTCATAGTTCTTCCAGAACCTTGTCCTGAACTTGGCAACACCTCATATGATTCTTCCTCATCATGTTTCTATCTGCTGAGTGTCAGTGGCAAAACTGCACTGCAGTGA 1212 0.4233 MLVALLLLVALSNAVRVNGDGGQCGSNPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVQLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVIVLPEPCPELGNTSYDSSSSCFYLLSVSGKTALQ 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00370 403 Pfam Glycosyl hydrolases family 28 135 340 IPR000743 GO:0004650|GO:0005975
Gma09g00370 403 Gene3D - 26 396 IPR012334 -
Gma09g00370 403 PANTHER POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN 371 397 - -
Gma09g00370 403 PANTHER PECTIN LYASE-RELATED 2 370 - -
Gma09g00370 403 SUPERFAMILY Pectin lyase-like 32 370 IPR011050 -
Gma09g00370 403 PANTHER POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN 2 370 - -
Gma09g00370 403 PANTHER PECTIN LYASE-RELATED 371 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00370 Gma-Chr9 3450113 3452674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00370 3 369 Glycoside Hydrolase AT3G06770 65.147 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00370 - - gmx:100806574 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00370 09 3450113 3452674 Gma09g00370 09 3450113 3452674 ECH
Gma15g01370 15 12218557 12221476 Gma09g00370 09 3450113 3452674 GST