Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00368 ATGGTGGTCCTCACTTTCACAGATGAGTTCACTAGCAGTGTCCAGCCAAGAAGATTGTTCAAGGCTTTGATCCTTGATGCTCCTAACCTCATCCCCAAGCTGATGCCTGAGGCCATTAAGAATGTTCAACTGGCTGAAGGGAATGGAGGCCCTGGAAGCATTCAGGAGATAACTATTGCTGAAGGTGGTAACATCAAACAGTTGAAGCATAGAATTGATGCAATAGACCTTGAGAAATTGACTTACAGCTACGCAGTGATTGATGGGGATGCTGCACTGGAAAAAGTGGATTCAATTTCACATGAGATTAAGTTCGAGGCCACTGAAGAGGGAGGTTGCAAGACCAAGAATGTTAGCAAGTATCATCCCAAAGAAGGAGTTGATGTTAAAGAGGAGGATTTCAAGGCTGCAAGAGAGGAAGGTTTGGCTCTCCTCAAGGTAGTGGATGCCTATCTTGTGGCAAACCCTGAGGCCTATGCTGAAGGAACTATAAATAGCGATGAGTTTACTAGCACTGTCCAGCCAGGAAGGTTGTTCAAGGCTTTGGTCCTTGATGCTCCAAACCTCATTCCCAAGCTGATGCCCGAGGCCATTAAGAATATTCAACTGGTTGAAGGGAATGGAGGCCCTGGAAGCATTCAGGAGATAACAATTGTTGAAGGTGATAAGATCAAACACTTGAAGCATAGAATTGATGTAATAGACCAAGAGAAGTTGACATACAGCTATGCAGTGATCGAGGGGGATGGTGCACTGGAAAAAGTGGATTCAATTGCACATGAGGTTAAGTTCGAGGCCACCGAAGAGGGAGGTTGCAAGATCAAGAATGTCAGCAAGTATCATCCCAAAGTAGGGGTTGATGTCAAAGAGGAAGATTTCAAGGCTGCAACTGAGGAAGGTTTGGCTCTCCTCAAGGTAGTGGATGCCTATCTTGTGGCAAACCCTGAGGCCTATGCTTGA 960 0.4562 MVVLTFTDEFTSSVQPRRLFKALILDAPNLIPKLMPEAIKNVQLAEGNGGPGSIQEITIAEGGNIKQLKHRIDAIDLEKLTYSYAVIDGDAALEKVDSISHEIKFEATEEGGCKTKNVSKYHPKEGVDVKEEDFKAAREEGLALLKVVDAYLVANPEAYAEGTINSDEFTSTVQPGRLFKALVLDAPNLIPKLMPEAIKNIQLVEGNGGPGSIQEITIVEGDKIKHLKHRIDVIDQEKLTYSYAVIEGDGALEKVDSIAHEVKFEATEEGGCKIKNVSKYHPKVGVDVKEEDFKAATEEGLALLKVVDAYLVANPEAYA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00368 319 Gene3D - 2 158 IPR023393 -
Gma09g00368 319 Gene3D - 163 317 IPR023393 -
Gma09g00368 319 SUPERFAMILY Bet v1-like 167 318 - -
Gma09g00368 319 CDD Bet_v1-like 5 152 - -
Gma09g00368 319 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gma09g00368 319 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gma09g00368 319 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gma09g00368 319 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gma09g00368 319 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gma09g00368 319 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gma09g00368 319 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gma09g00368 319 SUPERFAMILY Bet v1-like 4 159 - -
Gma09g00368 319 PANTHER - 166 319 - -
Gma09g00368 319 PANTHER - 1 160 - -
Gma09g00368 319 Pfam Pathogenesis-related protein Bet v 1 family 167 313 IPR000916 GO:0006952
Gma09g00368 319 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Gma09g00368 319 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 1 160 - -
Gma09g00368 319 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 166 319 - -
Gma09g00368 319 CDD Bet_v1-like 166 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00368 Gma-Chr9 3441148 3443814 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00368 - - gmx:100306381 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00368 09 3441148 3443814 Gma09g00368 09 3441148 3443814 ECH
Gma15g01368 15 12198944 12200331 Gma09g00368 09 3441148 3443814 GST
Gma09g00368 09 3441148 3443814 Gma17g00278 17 2242856 2244084 PCT