Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00298 ATGGAGGCAAAGTCACTGCTCAAGGGTTCATCACTTAAACCTTCTTATCCCATCCATAAGCTTTCAAAAACCACGATGATGACACCCAACTGCGTTAGATTCAGTTTCAACTACAACTCATGCCTCATATTCGCAAATGGGTACCCTTCTTCTTCACTTCCACTTTCTCTTCAGAATAAGCCCAGAAAATCGGCATCAGTGGTTGTGAGTGCCCGAAGGAAAGACAAGAAAGAAGATACCCATAGCTCTGTTCCCAAACCCGACGAGGTCACTGGTTTCTTCCCCGAAGCTGTGCTCCTTAAAAAGAGAACAGTTGAGGAAGAAGGGAAGCTTCTCCCGGAGTTTGAAGATGCTGATGAAAGAGAACTCTTTGAAGCGCTGATGCTTGAGCTGGATAGTGATATGGATGTTGATATATTGCGCCACTATGAGGTTATGTACTTAATTCATGAGAAGCATGAAGAGGAGGTTGTAGCTGTCAATGAGAAAATTCAAGACTTTTTGAGGGAGAAGAAAGGTCAGGTTTGGAGATTGAATGATTGGGGTATGAGAAGGCTAGCTTACAAAATAAAAAAAGCTAACAATGCCCACTACATGTTGATAAACTTTGAGTTGGATGCCAAATATATCAACGATTTCAAGACTCTGTTGGACCAAGATGAAAGAGTTATTCGGCATCTGGTGATAAAGAGGGATGAGGCAATCACTGAAGATTGCCCTCCTCCTCCGGATTTTCATACACTGCGTGGAAATGCAGATGATGATGAGGACGAAGAATTTGATGAAGATTATGATGGTGACTGGGATGGTGAAGATGAGGAGGATGGCGATGAAGGCGAGGATGATATTATTTTTGTAGATGGTGATGAAGATGATATAGATTCTAGAAAACAGACATCAGCAAATGTTAGACAACCAGATATAAGAAAATTGAGGGCTGAGAACGTAAGTAGGTAA 957 0.418 MEAKSLLKGSSLKPSYPIHKLSKTTMMTPNCVRFSFNYNSCLIFANGYPSSSLPLSLQNKPRKSASVVVSARRKDKKEDTHSSVPKPDEVTGFFPEAVLLKKRTVEEEGKLLPEFEDADERELFEALMLELDSDMDVDILRHYEVMYLIHEKHEEEVVAVNEKIQDFLREKKGQVWRLNDWGMRRLAYKIKKANNAHYMLINFELDAKYINDFKTLLDQDERVIRHLVIKRDEAITEDCPPPPDFHTLRGNADDDEDEEFDEDYDGDWDGEDEEDGDEGEDDIIFVDGDEDDIDSRKQTSANVRQPDIRKLRAENVSR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00298 318 Gene3D - 136 238 IPR014717 -
Gma09g00298 318 Coils Coil 150 170 - -
Gma09g00298 318 Pfam Ribosomal protein S6 142 230 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma09g00298 318 MobiDBLite consensus disorder prediction 66 88 - -
Gma09g00298 318 ProSitePatterns Ribosomal protein S6 signature. 182 191 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma09g00298 318 TIGRFAM S6: ribosomal protein bS6 141 232 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma09g00298 318 PANTHER 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL 103 251 - -
Gma09g00298 318 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 103 251 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma09g00298 318 MobiDBLite consensus disorder prediction 235 318 - -
Gma09g00298 318 SUPERFAMILY Ribosomal protein S6 140 240 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma09g00298 318 MobiDBLite consensus disorder prediction 68 85 - -
Gma09g00298 318 MobiDBLite consensus disorder prediction 254 289 - -
Gma09g00298 318 CDD bS6 142 231 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma09g00298 318 Hamap 30S ribosomal protein S6 [rpsF]. 140 233 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00298 Gma-Chr9 2810293 2813407 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00298 - - gmx:100812111 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00298 09 2810293 2813407 Gma09g00298 09 2810293 2813407 ECH
Gma15g01282 15 11350483 11357648 Gma09g00298 09 2810293 2813407 GST