Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03025 ATGCTGAAGCCACGCGCTTTTCCCAATGCGTTCTCTCTTCTTCTTCTTCTTCTTCATTCGCTGCTCGCTCTGGTCTCTGCACGAGGATCTCACAGAACCACTTGGAACACTCTCACTGGTTCTCCACCATTGGTCATAGCACGTGGTGGGTCGTCAGGGATATTTCCTGATTCCAGTGAATATGCCTACGAATTGGCAGCACAAATTAGTTTAAAAAATCTCATTGTGTGGTGTGATGTGCAATTAACGAAAGATGGGGAGGGGATCTGCATCTCAAACATCAAGCTTGAAAATGCTACTGACATTGATAAAATTTTTGAAAATAGAAGTAAGACATACTCAGTTAATGGTGTACAAACCAGTGCCTATTTTGCTGTTGACTACACCTTAACAGAGCTGCGTTCCAATGTCTTATTGATTCAGGGAGATTTCGCTCGAAATCCAAATTTTGATGACAATTTTGAAATTCTTACTGTGAATGAAATGATCACAATAACACCCGCATCTGGACCGTGGTTGAATATTCAGTATGATGCATTCTACGCTCAACACAATTTGAGTATGAAAAACTTTGTACTTTCTGTTTCTAGAACAGTAAATGTCAGTTATATCTCATCACCTGAAGCTGGTTTCCTGAGAAGTATAAAAGCACACATCAACCCAAGAATAACAAAAGTGGTCTTCAGGTTTCTGGAAAAAGATGAAGTAGATCCATCAACCAACCGGACTTATGGTTCACTGTTAAAAAACCTAGCATCTATCAAGACATTTGCTTCAGGAATACTTGTTCCCAAAGGATACATATGGCCTGTAGATCCAACAGGTCTTTATCTACTACCACATACATCTTTGGTCTCTGATGCACACAAAGTGGGACTTGAAGTCTTTGCTTCAGATATTCTGAACGATATTCCAATAAGCTATAATTACAGTTATGACCCTGTTGCTGAGTACCTCAATTTCATTGACAATGGAAACTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCCCTAACGCCATCTGAAGCTATAGACTGCTTTGCTCACATAGGCCTCAATTCCCCAAAGAAAGTTAACATCTTGGTCATTTCAAAATATGGAGCGAGTGGAGATTATCCTCCTTGTACTGACTTGGCATATGAAAAAGCTATTTCAGATGGTGTGGATGTTCTTGACTGTCCTGTTCAAATGTCAAAGGATGGAATACCATTTTGCTTAAGCTCTATTGATCTTATAGAGAGCACAGATGTTGCTCTATCAAGTTTCAGCAAACTTGGCAAAATTATCCCAGAGATCAAATCTGGCAATGGAATATTTACATTTGACTTGGCTTGGGATGATATAAAAAGCTTGGCCCCCTCAATGTTGAACCCGTATTCTACAAGCTCTTTGTATAGGAACCCAAAATCTAACAAGAAGGGGCAATTTTTAACATTGTTAGATTTCTTGAACTTGACAAAAGCTCAGACTTCCCTATTAGGTGTTGTGATCATCATTGAGAATGCAGCCTATCTTGCAAGGAAACAAAATTTAAGTGTGACTGAAGCAGTGATTGATACTTTGAGCAAAGCAGGTTATGACAAACCAGGGGCTCCAAAAGTTATGATTCAATCCACTAATAGTTCTGTACTACTGAAATTCAAGGAGAAAACCAAGTACGAGCTTGTCTACAAGATTGATGAGATAATTCGTGATGCTGTTGATTCAGCTATTTCGGATATCAAAAGATTTGCTCATTCTGTGGTTGTCAAGAAGGCCTCTGTATATCCTGATCGTAAACAGTTTGTGACTGGCTCTACAAAGATTGTGCCAAAGTTCAAATCTTCTAATCTCACTGTTTATGTAGAAACATTCAGCAATGAGTTTGTATCTCAGGCATGGGATTTCATGTCAGATGCAACTGTGGAGATCAACACATTTGTTAAGGATGCCGGAATAGATGGTGTCATCACAGACTTCCCAAAAACAGCTAATAGATACAGAAGGAACAGATGCTTAAATTTGGGTGACAGAAAACCTCCTTACATGAAACCAGTTCAACTGCCCGGCCTTTTGTCAAAAATAGACAATTTTTCGTTGCCACCGGCATTggctcctgtccctcccctgactgaagctgaggtgacagaaccaccattgcctcctctttctaaaatagccccatctagccctattgctgggactgaaccaggagcacaaccgccgcgaaatgcacaggctaaggtcaccgtcgtcttccttttgtccactctgactactgtgcttgtaggttctcttctgctttga 2286 0.3605 MLKPRAFPNAFSLLLLLLHSLLALVSARGSHRTTWNTLTGSPPLVIARGGSSGIFPDSSEYAYELAAQISLKNLIVWCDVQLTKDGEGICISNIKLENATDIDKIFENRSKTYSVNGVQTSAYFAVDYTLTELRSNVLLIQGDFARNPNFDDNFEILTVNEMITITPASGPWLNIQYDAFYAQHNLSMKNFVLSVSRTVNVSYISSPEAGFLRSIKAHINPRITKVVFRFLEKDEVDPSTNRTYGSLLKNLASIKTFASGILVPKGYIWPVDPTGLYLLPHTSLVSDAHKVGLEVFASDILNDIPISYNYSYDPVAEYLNFIDNGNFSVDGVLSDFPLTPSEAIDCFAHIGLNSPKKVNILVISKYGASGDYPPCTDLAYEKAISDGVDVLDCPVQMSKDGIPFCLSSIDLIESTDVALSSFSKLGKIIPEIKSGNGIFTFDLAWDDIKSLAPSMLNPYSTSSLYRNPKSNKKGQFLTLLDFLNLTKAQTSLLGVVIIIENAAYLARKQNLSVTEAVIDTLSKAGYDKPGAPKVMIQSTNSSVLLKFKEKTKYELVYKIDEIIRDAVDSAISDIKRFAHSVVVKKASVYPDRKQFVTGSTKIVPKFKSSNLTVYVETFSNEFVSQAWDFMSDATVEINTFVKDAGIDGVITDFPKTANRYRRNRCLNLGDRKPPYMKPVQLPGLLSKIDNFSLPPALAPVPPLTEAEVTEPPLPPLSKIAPSSPIAGTEPGAQPPRNAQAKVTVVFLLSTLTTVLVGSLLL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03025 761 Gene3D Phosphatidylinositol (PI) phosphodiesterase 360 660 IPR017946 GO:0006629|GO:0008081
Gma08g03025 761 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 343 IPR017946 GO:0006629|GO:0008081
Gma08g03025 761 ProSiteProfiles GP-PDE domain profile. 360 661 IPR030395 GO:0006629|GO:0008081
Gma08g03025 761 ProSiteProfiles GP-PDE domain profile. 43 344 IPR030395 GO:0006629|GO:0008081
Gma08g03025 761 Pfam Glycerophosphoryl diester phosphodiesterase family 76 338 IPR030395 GO:0006629|GO:0008081
Gma08g03025 761 Pfam Glycerophosphoryl diester phosphodiesterase family 367 656 IPR030395 GO:0006629|GO:0008081
Gma08g03025 761 CDD GDPD_SHV3_repeat_2 360 660 - -
Gma08g03025 761 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 14 755 - -
Gma08g03025 761 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 14 755 - -
Gma08g03025 761 SUPERFAMILY PLC-like phosphodiesterases 360 661 IPR017946 GO:0006629|GO:0008081
Gma08g03025 761 CDD GDPD_SHV3_repeat_1 43 343 - -
Gma08g03025 761 SUPERFAMILY PLC-like phosphodiesterases 42 343 IPR017946 GO:0006629|GO:0008081
Gma08g03025 761 MobiDBLite consensus disorder prediction 704 735 - -
Gma08g03025 761 MobiDBLite consensus disorder prediction 704 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03025 Gma-Chr8 46839039 46846011 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03025 5 761 Receptor kinase-like Gene Family AT4G26690 53.272 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03025 - - gmx:100815471 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03025 08 46839039 46846011 Gma02g02780 02 53408604 53415701 PCT