Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02780 ATGTGGAATCCACGCGCTCTCTCTGCGCCACTCGCCCTGCTTCTTCTTCACTCGCTCCTTGCTCTCATCTCTGCTCAGAGATCTACCTGGAACACTCTCAGCGGAGGTGCGCCATTGGTTGTAGCACGTGGTGGATTTTCGGGGATGCTTCCTGATTCCAGTGATGCTTCCTATAATTTGGCAGTAATAACGAGTGGACCAGATGTCTATATATGGTGTGATGTGCAATTAACAAAAGATGGACTTGGGATTTGCCAGCCAGATATAAACCTTGCAAATTCTACTTACATTGCAAGCGCTTACCCAAATAAAACCACAAGTTACTTAGTTAATGGTGTACCCACCCGTGGCTATTTTCCTCTGGATTATACCCTGAAGGACCTATCTAGTGTCGTCTTAACTCAGGGAGTATACTCTCGATCCAACCTGTTTGATGGCAACAATTTTGGAATTCTTACTGTTGAGGATTTAGCTAAATTAAGGCAAAAACCAAAAGGAAAATGGTTGAATATTCAGCATGATGCATTCTACGCACAACACAATTTGAGTATGAGAAGCTTTGTGCTTTCAGTTTCTAGAAAAGTAGTTTTCAGTTATATCTCATCGCCTGAGGTTGGTTTTCTAAGAAGTATAGCATCACGCTTCAACCCAAAAACAACAAAATTGGTCTTCAGGTTTATGGGACTGAGTGATGTAGATCCATCAACCAATCGGACTTATGGTTCGCTTTTACAAAATCTTACATTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCAAAGGGATACATATGGCCCGTAGATGCAACTCTTTATCTACAATCACATACATCTTTGGTCTCAGATGCACATAAAGCAGGCCTGGAAGTTTTTGCATCAGATTTTGTGAATGATGTTCCATTTAGCTTCAATTACAGTTATGATCCTCTTGCCGAGTACCTCCAATTTGTAGACAATGGTGACTTCTCTGTTGATGGTGTGCTGAGTGATTTTCCCATAACTCCATTTGAAGCTATAGGTTGCTTTGCTCACCTAGCCACCAATGCTACAAAAAAAGATAAAACTTTGGTTATCTCAAAATATGGAGCAAGTGGAGATTATCCTGCTTGTACCGACTTAGCATATAATAAGGCCATATCTGATGGTGTGGATGTTCTTGACTGTCCTGTTCAAATGTCTAAGGACGGAACACCATTTTGCTTAAACTCCATTGATCTTATAGAGAGTACAACAGTCGCCCAATCAAGCTTCAGCAAATTTGCCATGACTATCCCTGAGATCAAATCTGGCATTGGCATATTTGCATTCAACTTGACATGGAATGATATAAAAAGCTTGACCCCCTCAATATTGAACCCTTTTGCAAAATACAGATTGTTCAGGAATCCAAGATCTAAGAATGCTGGGACATTGTTGGCGTTATCAGATTTCTTGTCCTTGACAAAAAATCAGACTTCTCTATCAGGTGTCGCTATCATTGTTGAGAATGCAGCCTATCTTGCAGACAAGCAAGGATTAAGTGTGATTGATGCTGTCATCGGTGCTTTGAGCAAAGCAGGTTATGATAAACCAGGATCCCAAAAGGTTTATATTCAATCCACTAATAGTTCTGTACTGCTGAAGTTCAAGGAGAAAACCAGTTATGAGCTTGTGTACAAGATTGACGAGACCATTGGTGATGCCGCTAATGCAGCTGTTGAGGATATAAAGAGCTTTGCTAGTTCTGTGGTTGTCAACAAGGACTCCATAATTCCTAATAATGATCAATTCCTGACGGCCTATACAAATATTGTGCCAAAGCTAAAAAATGCTAACCTCTCAGTTTTTGTAGAAACATTTAGCAATGAGTTTGTGTCTCAAGCATGGGATTTCTTCTCAGATGCAACTGTTGAGATCAACACATATATTACGGGAGCACAAATTGATGGTATCATCACAGACTTCCCTAAAACTGCTGACAGATACAGAAGGAACAAATGCTTAGGTTTGGGTGACAACAAACCTACTTACATGGAACCTGTTCAACCAGGTAGTCTTTTTGGACTCATTACCAAAGAATTCTTGCCTCCAGCCGaggctccatttccacccttgacagaatctgaagtggcagagccacctttgcctcctgttgctaaaatagccccagcttccagcccgaatgccggaaccaaatcaccacagggaaattcacagcctaaagtcactgtctgcttcttcttgtccactctggccgtgtttatagcttctcttctgctttga 2262 0.3714 MWNPRALSAPLALLLLHSLLALISAQRSTWNTLSGGAPLVVARGGFSGMLPDSSDASYNLAVITSGPDVYIWCDVQLTKDGLGICQPDINLANSTYIASAYPNKTTSYLVNGVPTRGYFPLDYTLKDLSSVVLTQGVYSRSNLFDGNNFGILTVEDLAKLRQKPKGKWLNIQHDAFYAQHNLSMRSFVLSVSRKVVFSYISSPEVGFLRSIASRFNPKTTKLVFRFMGLSDVDPSTNRTYGSLLQNLTFIKTFASGILVPKGYIWPVDATLYLQSHTSLVSDAHKAGLEVFASDFVNDVPFSFNYSYDPLAEYLQFVDNGDFSVDGVLSDFPITPFEAIGCFAHLATNATKKDKTLVISKYGASGDYPACTDLAYNKAISDGVDVLDCPVQMSKDGTPFCLNSIDLIESTTVAQSSFSKFAMTIPEIKSGIGIFAFNLTWNDIKSLTPSILNPFAKYRLFRNPRSKNAGTLLALSDFLSLTKNQTSLSGVAIIVENAAYLADKQGLSVIDAVIGALSKAGYDKPGSQKVYIQSTNSSVLLKFKEKTSYELVYKIDETIGDAANAAVEDIKSFASSVVVNKDSIIPNNDQFLTAYTNIVPKLKNANLSVFVETFSNEFVSQAWDFFSDATVEINTYITGAQIDGIITDFPKTADRYRRNKCLGLGDNKPTYMEPVQPGSLFGLITKEFLPPAEAPFPPLTESEVAEPPLPPVAKIAPASSPNAGTKSPQGNSQPKVTVCFFLSTLAVFIASLLL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02780 753 Gene3D Phosphatidylinositol (PI) phosphodiesterase 354 655 IPR017946 GO:0006629|GO:0008081
Gma02g02780 753 Gene3D Phosphatidylinositol (PI) phosphodiesterase 37 338 IPR017946 GO:0006629|GO:0008081
Gma02g02780 753 MobiDBLite consensus disorder prediction 709 731 - -
Gma02g02780 753 CDD GDPD_SHV3_repeat_1 38 338 - -
Gma02g02780 753 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 14 752 - -
Gma02g02780 753 SUPERFAMILY PLC-like phosphodiesterases 37 337 IPR017946 GO:0006629|GO:0008081
Gma02g02780 753 Pfam Glycerophosphoryl diester phosphodiesterase family 362 651 IPR030395 GO:0006629|GO:0008081
Gma02g02780 753 ProSiteProfiles GP-PDE domain profile. 38 339 IPR030395 GO:0006629|GO:0008081
Gma02g02780 753 CDD GDPD_SHV3_repeat_2 356 655 - -
Gma02g02780 753 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 14 752 - -
Gma02g02780 753 SUPERFAMILY PLC-like phosphodiesterases 354 656 IPR017946 GO:0006629|GO:0008081
Gma02g02780 753 ProSiteProfiles GP-PDE domain profile. 355 656 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02780 Gma-Chr2 53408604 53415701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02780 12 753 Receptor kinase-like Gene Family AT4G26690 56.894 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02780 - - gmx:100811399 1458.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02780 02 53408604 53415701 Gma02g02780 02 53408604 53415701 ECH
Gma08g03025 08 46839039 46846011 Gma02g02780 02 53408604 53415701 PCT