Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02934 ATGGCTGCTTCAATCCCATTTACAGGTATCAACTCCTCAAGGGTGCTTCCCATTCCTAGAGAACCACACCACCCATTTTCCCATTTGCTCTCAAACATGTCAAAGTTTGCATCTTTGAGAACCCcttcttcttcttctgcttcttcttcttcttcttctGTGTCTTGCTCTCTCACCAAAGACCCTTACTCTGTTGTGCCATTGGAGGAACATAGCAAAATGGATAATGGGTCGGTTCTGCTTCAGAGACCCGATTCGTTTGGGAGGTTTGGCAAGTTTGGAGGGAAGTATGTCCCTGAGACTCTGATGCATGCTCTCACTGAGCTTGAGGCTGCTTTTTATTCCCTCTCTGCTGATGAAGAGTTTCAGAAAGAACTAGCTGGGATTCTAAAAGATTATGTTGGACGGGAGAGTCCTCTTTATTTTGCTGAAAGGTTGACGGAGCATTACAAGAGGCCTAATGGTGAAGGGCCTCACATTTATCTGAAGAGGGAAGATCTCAATCACACCGGGGCTCACAAAATTAACAATGCTGTTGCTCAAGCTTTGCTTGCTAAGAGGTTGGGCAAAAAACGCATTATTGCTGAAACTGGAGCGGGTCAGCATGGAGTTGCCACTGCTACTGTATGTGCTCGATTTGGTTTAGAATGCATTATTTATATGGGCGCACAGGATATGGAAAGGCAGGCTCTCAATGTTTTCAGAATGCGTCTTCTTGGTGCTGAGGTGAGACCCGTCCATTCTGGGACTGCTACACTGAAGGATGCGACATCAGAGGCTATAAGGGACTGGGTAACTAATGTGGAGACAACTCATTATATTTTGGGTTCTGTTGCTGGGCCGCATCCATATCCAATGATGGTAAGAGAGTTTCATGCTGTGATTGGCAAGGAGACCAGAAAGCAAGCTTTGGAAAAGTGGGGAGGGAAACCAGATATTCTGATTGCATGTGTTGGTGGAGGTTCAAACGCCATGGGACTTTTCAATGAATTTGTTGATGACAAAGATGTTAGGCTAATTGGCGTGGAGGCTGCTGGATTTGGCCTGGACAGTGGCAAGCACGCGGCAACGTTAACGAAGGGAGAAGTTGGGGTTTTACATGGAGCTATGAGCTACCTGCTGCAGGATGATGATGGACAAATAGTTGAGCCTCACTCAATTAGTGCAGGCTTGGACTACCCTGGTGTGGGTCCGGAACATAGCTTTTTGAAAGATTTAGGGCGTGCTGAATATCATAGCATCACAGATGAAGAAGCATTGGAAGCTTTTAAGAGAGTTTCGCGACTTGAAGGCATAATTCCAGCTCTGGAAACATCTCATGCGTTGGCATATCTAGAGAAAGTGTGTCCAACCCTTCCTAATGGAGCCAAGGTTGTGGTTAACTTCAGTGGCCGGGGTGATAAGGATGTTCAAACTGCTATCAAGTGCTTGAAGCTTTGA 1440 0.4507 MAASIPFTGINSSRVLPIPREPHHPFSHLLSNMSKFASLRTPSSSSASSSSSSVSCSLTKDPYSVVPLEEHSKMDNGSVLLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFYSLSADEEFQKELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDILIACVGGGSNAMGLFNEFVDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKVCPTLPNGAKVVVNFSGRGDKDVQTAIKCLKL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02934 479 PIRSF Trp_syn_beta 73 479 IPR023026 GO:0000162|GO:0004834
Gma08g02934 479 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 84 475 IPR036052 -
Gma08g02934 479 Gene3D - 135 470 IPR036052 -
Gma08g02934 479 PANTHER TRYPTOPHAN SYNTHASE-RELATED 37 478 - -
Gma08g02934 479 Hamap Tryptophan synthase beta chain [trpB]. 83 477 IPR023026 GO:0000162|GO:0004834
Gma08g02934 479 Pfam Pyridoxal-phosphate dependent enzyme 134 464 IPR001926 -
Gma08g02934 479 Gene3D - 90 292 IPR036052 -
Gma08g02934 479 PANTHER TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED 37 478 - -
Gma08g02934 479 TIGRFAM trpB: tryptophan synthase, beta subunit 88 475 IPR006654 GO:0004834|GO:0006568
Gma08g02934 479 CDD Trp-synth_B 105 472 IPR006654 GO:0004834|GO:0006568
Gma08g02934 479 ProSitePatterns Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 167 181 IPR006653 GO:0004834|GO:0006568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02934 Gma-Chr8 45770767 45775222 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02934 K01696 - gmx:100792812 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00912 18 10756662 10760737 Gma08g02934 08 45770767 45775222 GST