Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02076 ATGTGGAGGCTGAAGATAGCAGAAGGTGGAAATGAGGCATACATATTCAGCACAAACAATTTTGTTGGGAGGCAGACATGGGAGTTTGATCCTGAAGCAGGGACTCCAGAGGAACGAGCCCAGGTTGAAGCAGCTCGTAAGGATTTCTACCACCACCGCTTCAAGGTCAAGCCCTGTGCTGACCTCCTTTGGCGTTTTCAGATTCTGAGAGAAAATAACTTCAAACAAACAATACCTAGTGTGAAGATAGAAGATGGAGAGGAAATAACTTACCAAAAAGTCACAAGCACTGTGAGAAGGGGCGCACATCACCTTGCGGCATTGCAGACCAGTGATGGCCATTGGCCTGCTCAAATTGCAGGTCCTCTGTTTTTTCTTCCTCCTTTGGTTTTCTGTATGTATATTACAGGGCATCTTGAATCAGTTTTTCCAGAAGAACATCGCAAAGAAATTCTCCGTTACATATATTATCACCAGAATGAAGATGGAGGATGGGGACTACACATAGAGGGTCATAGCACTATGTTTTGTACAGCACTGAACTATATATGCATGCGAATTCTTGGAGAAGGACCTAATGGAGGTCATTATAATGCTTGTGCTAGAGCAAGAAATTGGATTCGAGATCATGGTGGTGTAACACATATACCTTCATGGGGGAAAACTTGGCTTTCTATACTTGGTGTATTTGATTGGTGTGGAAGCAACCCAATGCCCCCAGAGTTTTGGATCCTTCCATCGTTTCTTCCTATGCATCCGGCTAAGATGTGGTGTTATTGTCGATTGGTATACATGCCCATGTCTTATTTATATGGGAAGAGGTTTGTGGGTCCAATCACACCACTCATCTTACAATTAAGAGAAGAGCTATTCACTCAACCTTATGAAAAAGTTAATTGGAAGAAAGCACGTCACCAATATGCAAAGGAAGATCTTTATTATCCACATCCTTTGGTACAAGATCTAATATGGGATAGTTTATACATATTTACTGAGCCATTGCTTACTCGTTGGCCTTTCAACAAGTTGATTAGAGAAAAAGCCCTTCAAGTAACAATGAAGCATATTCATTACGAAGATGAGACTAGTCGATACATAACCATTGGTTGTGTGGAAAAGGTTTTATGTATGCTTGCTTGTTGGGTGGAAGATCCAAACGGAGATGCTTTCAAGAAGCATCTTGCAAGGATCCCAGATTACTTATGGGTTTCTGAAGATGGAATGACCATGCAAAGTTTTGGTAGTCAAGAATGGGATGCTGGCTTTGCTGTTCAAGCTTTTCTTGCCACTAACCTAATTGAAGAAATTGGTCCTACACTTGCAAAAGGACATGACTTCATCAAGAAGTCTCAGGTAAAAGATAATCCTCTTGGAGATTTTAAAAGTATGTATCGTCATATTTCTAAAGGATCTTGGACATTCTCTGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAAGTTTAAAGTGTTGTCTACTTCTATCAATGTTGCCACCAGAGATTGTGGGAGAAAAGATGGAACCTGAAAGGTTGTACGATTCAGTCAATGTCTTGTTGTCGCTTCAGGCAAGTGGTTTAGCTGCATGGGAGCTTGCAGGAGCTCAAGAGTGGTTAGAATTACTCAATCCCACAGAATTTTTTGCGGACATTGTAGTTGAACATGAATATGTTGAGTGCACTGGATCTGCAATCCAAGCTTTAGTTTTGTTCAAGAATCTATATCCAGGACATAGGAAGAAAGAGATAGAAAATTTCATTGCCAATGCAGTTCGATTCCTTGAAGATACACAAACAGCTGATGGTTCATGGTATGGAAACTGGGGAGTTTGCTTCACTTATGGCTCTTGGTTTGCACTTGGCGGTCTAGCAGCTGCTGGCAAGACTTACATCAATTGTGCTGCCATTCGCAAAGCCGTTAAATTTCTACTTTCAACACAGAGGGAAGACGGTGGATGGGGAGAGAGCTATCTTTCAAGCCCAAAAAAGataTATGTACCTCTAGAAGGAAGTCGATCAAATGTTGTACATACAGCATGGGCTCTTATGGGACTAATTCATGCTGGACAGGCGGATAGAGACCCTAAGCCTCTTCATCGAGCTGCAAAGTTGCTCATTAATTCTCAGTTGGAAGAGGGTGATTGGCCCCAGCAGGAAATCACAGGAGTATTCATGAAAAATTGCATGTTGCATTATCCAATGTACAGAGATATTTATCCAATGTGGGCTCTAGCTGAATATCGTAGGCGGGTTCCATTGCCTTCCACTGAAGTTTAA 2283 0.417 MWRLKIAEGGNEAYIFSTNNFVGRQTWEFDPEAGTPEERAQVEAARKDFYHHRFKVKPCADLLWRFQILRENNFKQTIPSVKIEDGEEITYQKVTSTVRRGAHHLAALQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLESVFPEEHRKEILRYIYYHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPNGGHYNACARARNWIRDHGGVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTQPYEKVNWKKARHQYAKEDLYYPHPLVQDLIWDSLYIFTEPLLTRWPFNKLIREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARIPDYLWVSEDGMTMQSFGSQEWDAGFAVQAFLATNLIEEIGPTLAKGHDFIKKSQVKDNPLGDFKSMYRHISKGSWTFSDQDHGWQVSDCTAESLKCCLLLSMLPPEIVGEKMEPERLYDSVNVLLSLQASGLAAWELAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKNLYPGHRKKEIENFIANAVRFLEDTQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYINCAAIRKAVKFLLSTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQADRDPKPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSTEV 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02076 760 Gene3D - 504 721 - -
Gma08g02076 760 PANTHER LUPEOL SYNTHASE 1 1 754 - -
Gma08g02076 760 CDD SQCY_1 98 749 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma08g02076 760 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
Gma08g02076 760 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 97 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma08g02076 760 SFLD Prenyltransferase Like 2 84 752 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma08g02076 760 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 754 IPR008930 -
Gma08g02076 760 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 754 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma08g02076 760 Pfam Squalene-hopene cyclase C-terminal domain 418 751 IPR032696 -
Gma08g02076 760 Pfam Squalene-hopene cyclase N-terminal domain 99 403 IPR032697 -
Gma08g02076 760 ProSitePatterns Terpene synthases signature. 603 617 IPR002365 GO:0016866
Gma08g02076 760 Gene3D - 119 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02076 Gma-Chr8 18614311 18623946 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02076 K15813 - gmx:100778398 1606.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02076 08 18614311 18623946 Gma08g02076 08 18614311 18623946 ECH
Gma07g00011 07 132708 141478 Gma08g02076 08 18614311 18623946 GST