Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00011 ATGTGGAGGCTGAAGATAGCAGATGGAGGAAATGATCCATACATATTCAGCACAAACAATTTCGTTGGGAGGCAGACATGGGAGTTTGATCCTGAAGCAGGCAGTCCAGAGGAACGGGCCCAGGTTGAAGCAGCTCGTCAGCATTTCTACCACAACCGCTTCAAGGTCAAGCCCTGCGCTGACCTCCTTTGGCGTTTTCAGGTTCTCAGAGAAAATAACTTCAAACAAACAATTCCTCGTGTGACTATAGAAGATGGAGAGGAAATCACATACCAAAAAGTCACAAGCGCCGTCAGAAGGGGCGCACACCACCTTGCGGCACTGCAGACCTCTGATGGCCATTGGCCTGCTCAAATTGCAGGTCCTCTCTTCTTTCTTCCTCCTTTGGTTTTTTGTATGTATATTACAGGAAATCTTGAATCAGTATTTCCAGAAGAACATCGCAAAGAAATTCTTCGTTACACATATTATCACCAGAATGAAGACGGAGGATGGGGACTACACATAGAGGGTCATAGCACTATGTTTTGTACTGCACTGAACTATATATGCATGCGAATGCTTGGAGAAGGACCTAATGGAGGTCATGACAATGCTTGTGCTAGAGCAAGAAAGTGGATTCGAGATCATGGTGGTGTAACACATATACCTTCATGGGGAAAAACTTGGCTTTCGATACTCGGTGTATTTGATTGGTGCGGAAGCAACCCAATGCCCCCAGAGTTTTGGATCCTTCCATCTTTTCTTCCTATGCATCCAGCTAAGATGTGGTGTTACTGTCGATTGGTATACATGCCTATGTCTTACTTATATGGGAAGAGGTTTGTGGGTCCAATCACACCACTCATCTTACAATTAAGAGAAGAGTTGTTTACTCAACCTTATGAAAAAGTTAATTGGAAGAAAGCGCGTCACCAATGTGCAAAGGAAGATCTTTACTATCCCCATCCTTTGATACAAGACCTAATATGGGATAGTTTATACATATTCACTGAACCGCTACTTACTCGTTGGCCTTTCAACAAGTTGATTAGAGAAAAGGCCCTTCAAGTAACTATGAAACATATTCATTATGAAGATGAGACTAGTCGATACATAACCATTGGTTGTGTGGAAAAGGTTTTATGTATGCTTGCTTGTTGGGTGGAAGATCCAAACGGAGATGCTTTCAAGAAGCATCTTGCAAGGGTCCCAGATTACTTATGGGTTTCTGAAGATGGAATGACCATGCAGAGTTTTGGTAGCCAAGAATGGGATGCTGGCTTTGCTGTTCAAGCTTTGCTTGCCACTAACATAATTGAAGAAATTGGTCCTACGTTTGCAAAAGGACATGATTTCATCAAGAAGTCTCAGGTGAAGGATAATCCTTTTGGAGATTTTAAAAGTATGCATCGTCATATTTCTAAAGGGTCTTGGACATTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTAAAGTGTTGTCTACTTCTATCAATGTTGCCACCAGAGATTGTGGGAGAAAAGATGGAACCTGAAAGATTATACGATTCAGTCAATGTCTTGTTGTCGCTTCAGGCAAGTACCATTAATAAAAAAGGTGGTTTAGCAGCATGGGAGCCTGCAGGAGCTCAAGAGTGGTTAGAATTACTCAATCCCACAGAATTTTTTGCGGACATTGTAGTTGAACATGAATATGTTGAGTGCACTGGATCTGCAATCCAAGCTTTAGTTTTGTTCAAGAAGCTATATCCAGGACATAGGAAGAAAGAGATAGAAAATTTCATTACCAATGCAGTTCGATTCCTTGaagatacacaaacagctgatggttcatggtatggaaattggggagtttgcttcacttatggctcttggtttgcacttggaggtctagCAGCTGCTGGTAAGACTTACACCAATTGTGCTGCCATTCGCAAAGCCGTTAAATTTCTACTTACAACACAAAGAGAGGACGGTGGATGGGGAGAGAGTTATCTTTCAAGCCCAAAAAAGATATATGTACCTCTAGAAGGAAGCCGATCAAATGTTGTACATACAGCATGGGCTCTTATGGGACTAATTCATGCTGGACAGGCGGATAGAGACCCCATGCCTCTTCACCGTGCTGCAAAGTTGCTCATTAATTCTCAGTTGGAAGAGGGTGATTGGCCCCAACAGGAAATCACGGGAGTATTCATGAAAAATTGCATGTTGCATTATCCAATGTACAGAGATATTTATCCAATGTGGGCTCTAGCTGAATATCGAAGGCGGGTTCCATTGCCTTCCACTGAAGTTTAA 2301 0.4081 MWRLKIADGGNDPYIFSTNNFVGRQTWEFDPEAGSPEERAQVEAARQHFYHNRFKVKPCADLLWRFQVLRENNFKQTIPRVTIEDGEEITYQKVTSAVRRGAHHLAALQTSDGHWPAQIAGPLFFLPPLVFCMYITGNLESVFPEEHRKEILRYTYYHQNEDGGWGLHIEGHSTMFCTALNYICMRMLGEGPNGGHDNACARARKWIRDHGGVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTQPYEKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLIREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARVPDYLWVSEDGMTMQSFGSQEWDAGFAVQALLATNIIEEIGPTFAKGHDFIKKSQVKDNPFGDFKSMHRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLPPEIVGEKMEPERLYDSVNVLLSLQASTINKKGGLAAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFITNAVRFLEDTQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQADRDPMPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSTEV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00011 766 Gene3D - 493 727 - -
Gma07g00011 766 SFLD Prenyltransferase Like 2 84 758 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma07g00011 766 PANTHER LUPEOL SYNTHASE 1 1 760 - -
Gma07g00011 766 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
Gma07g00011 766 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 760 IPR008930 -
Gma07g00011 766 CDD SQCY_1 98 755 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma07g00011 766 Pfam Squalene-hopene cyclase C-terminal domain 418 757 IPR032696 -
Gma07g00011 766 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 760 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma07g00011 766 ProSitePatterns Terpene synthases signature. 609 623 IPR002365 GO:0016866
Gma07g00011 766 Gene3D - 119 414 - -
Gma07g00011 766 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 97 757 IPR018333 GO:0005811|GO:0016104|GO:0016866
Gma07g00011 766 Pfam Squalene-hopene cyclase N-terminal domain 99 402 IPR032697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00011 Gma-Chr7 132708 141478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00011 K15813 - gmx:547702 1617.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00011 07 132708 141478 Gma07g00011 07 132708 141478 ECH
Gma07g00011 07 132708 141478 Gma08g02076 08 18614311 18623946 GST