Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02001 ATGGCTTCTGCCAGTGATTTGACAGAGACAGAGAGGAGCACAGCAAAGAGGCTTAGACATGTGGGGAGGAAGCTCCTCAAGTGCTCTTCGGTTCACAAGCTTCTTCAACTCCTTGATAAATTGGAGCTGCTATTGTCAACCCTGGAGCAAGAACCAACTAAGCCCATTCAAGAATCACTTGTACCTTCAATGAAGGCATTGATTTCTGACGAACTTTTGAGGCACACAGATGAGGATGTTAAGATTTCAGTTACATCTTGCATCAATGAGATTACAAGAATCACTGCACCAGATGTCCCTTATGATGACGAACAAATGAAGGAAATCTTCAAGCTCACAGTGGCATCTTTTGAGAAATTGTCTCACATATCTGGCCGTGGCTATGAAAAAGCACTTACCATACTCAATAATGTCAATAAAGTCCGATTATGCTTGGTCATGCTGGACCTTGAGTGTAATGACCTGGTTATTGAAATGTTTCAGCATTTCTTGAGATTTATAAGGTCAGACCATCCCCACAATGCAATTCATTCGGTGGAATCAATAATGACCCTGATTTTGCAAGAAATTGAACAAATTTCCCCAGCTCTTCTTAGACCTCTGTTGGATAGTGTAGGGATTGAAAATCAGACCATTTCACCTATGTCTTGGTCATTGGGGCAGAAAGTAATTAGCAACTGTGCTGTTAATCTCAAGCCTTATCTCATGAAGGCAGTGGAGTCCTCAGGCAGAGCGCTAAATGAGTATGCACAAATACTAACTGATATTTGCCAGAACCAATCTGAATCCCCTCAATGTGATGATTCAAATGGTGCTAAGAAGACAGTGgttcaggaagctgagaacaaacttgatgctcctaaagatgcagaggaacaaccatgtgacGAAACCAAGGGGCATGAACTGGATATTACTGGTGACAGAGATGTCAAAATTTTGGATGATACAAAGTCAAACAGAAGAAGTGGTACTTCTACTATGGATGGTGAAGCAATAAAAATATCTGGTTCAAATAGGAGACCACATTCTGAAATAACTAAGAACTCCAAAAGAGGAAATGCGAAAGCCAATTTGGAAACTGACAATTTAGAGTCTGTTCAGGAACCAAAATCAGAAACGCAGTTGAATACTGTGCCAAGGAAGAGGGGCCGTAAGCCTAATTCTTTAATGAATGCtgaggaaggctatgatcactcatggatttctcgggaaacaaaacctgggaaatcagctcaatccagaaaggctcgcaattgcagctctccttatccatcttctgaaaaacctacttccagaaaggataagttgcatagaatgcctaaaactgtaagtgaaactccagtttccatgcagaaaagtgagaacatagcagaagctgtccaatccagaaggactcaaaatattggcactgattttccagctaatgatacaagcgaaggtcatgaagctttagcttctaaacctaaagctgatgagaatatggatgctgcttctgtaaataataacattcttgatgGTCGTCATGTCAAACGTGGCCAGCCAAGGAAAATAAATAACACTGGGAATCAAGATGTTCATTCCAATTCTGTGTCAATGTTAAAGGAAGACAACTTGAATTCTCTTCTTGAGAATACTTCTTTGGATTCCCCAACAGTTAGGTTGGAAAAGGAATCTGAAGTAAAAACCATTAGGAAAATCAAATTTTCTGTAAGGGTTGATGGGAAACTTGTGGCTCCAGAATCAGTTGCTAAGAGGGAACCTAGCGCTTCTTGTGGAGATGAGGGAAAACACAAGTCATCTGTGAATGTTGAGCTAGAAAATATAGAAGAGAGCAGATCCTCAGTTCAAACAGATGTTAGGAAAAGGAGGAGGCTTAATGCTACTCCTAATAAGGGTCTCAACAAATCATCAGCTGTGAAGGAACTGATTGTAGAATCTGCAAGTAAAATGTTAGGTGGTGTCAAGGAAACCCCACAAGCAAGGTTGAGGAGAAGACACATTACTGCGAATGTAGAGGCGTCTGATGATGGTAACTCATTGGTTGGTAGAAGGATCAAGGTCTGGTGGCCGAAGGATAAGATGTTTTATGAAGGTGTTATTGATTCTTATGATCCTATCAAAGGAAAGCACAAGATTTTGTATGCCGATGGTGATGTTGAAGTGTTGAACCTCAAAAGACAGCGTTGGGAACCAGTTACTGTTGATGTTGTGTTAGATGAGGAAGGACTTGCACATCAGAGGCTTGCACAAGCATCAGACATAGCAGAAAAGGGCAAGGAAAAATCCACGTTGGAGTCTGCCAAGGGTGCAAACATCAATTCTCAGTCCAGTAAGAGAAGAGCTTCAGCTTCTGCCGGCATCTCCAAATCTGTGAAATCTGCGGATACTTCTGCTGTTGATTTAGCTGATGATTCACCTATAATTTTTAGCAGAAAAGACTCTAGGACGCCTAAAACCAAAAGAAGGGTGTAA 2475 0.3451 MASASDLTETERSTAKRLRHVGRKLLKCSSVHKLLQLLDKLELLLSTLEQEPTKPIQESLVPSMKALISDELLRHTDEDVKISVTSCINEITRITAPDVPYDDEQMKEIFKLTVASFEKLSHISGRGYEKALTILNNVNKVRLCLVMLDLECNDLVIEMFQHFLRFIRSDHPHNAIHSVESIMTLILQEIEQISPALLRPLLDSVGIENQTISPMSWSLGQKVISNCAVNLKPYLMKAVESSGRALNEYAQILTDICQNQSESPQCDDSNGAKKTVVQEAENKLDAPKDAEEQPCDETKGHELDITGDRDVKILDDTKSNRRSGTSTMDGEAIKISGSNRRPHSEITKNSKRGNAKANLETDNLESVQEPKSETQLNTVPRKRGRKPNSLMNAEEGYDHSWISRETKPGKSAQSRKARNCSSPYPSSEKPTSRKDKLHRMPKTVSETPVSMQKSENIAEAVQSRRTQNIGTDFPANDTSEGHEALASKPKADENMDAASVNNNILDGRHVKRGQPRKINNTGNQDVHSNSVSMLKEDNLNSLLENTSLDSPTVRLEKESEVKTIRKIKFSVRVDGKLVAPESVAKREPSASCGDEGKHKSSVNVELENIEESRSSVQTDVRKRRRLNATPNKGLNKSSAVKELIVESASKMLGGVKETPQARLRRRHITANVEASDDGNSLVGRRIKVWWPKDKMFYEGVIDSYDPIKGKHKILYADGDVEVLNLKRQRWEPVTVDVVLDEEGLAHQRLAQASDIAEKGKEKSTLESAKGANINSQSSKRRASASAGISKSVKSADTSAVDLADDSPIIFSRKDSRTPKTKRRV 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02001 824 MobiDBLite consensus disorder prediction 281 319 - -
Gma08g02001 824 SUPERFAMILY Tudor/PWWP/MBT 679 720 - -
Gma08g02001 824 Pfam Sister chromatid cohesion protein PDS5 protein 33 236 - -
Gma08g02001 824 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 15 810 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 588 602 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 445 475 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 582 602 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 757 799 - -
Gma08g02001 824 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 15 810 IPR039776 GO:0007064
Gma08g02001 824 Gene3D - 673 727 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 398 412 - -
Gma08g02001 824 Coils Coil 31 51 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 767 796 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 351 377 - -
Gma08g02001 824 SUPERFAMILY ARM repeat 34 259 IPR016024 -
Gma08g02001 824 MobiDBLite consensus disorder prediction 281 492 - -
Gma08g02001 824 MobiDBLite consensus disorder prediction 413 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02001 Gma-Chr8 18004904 18018997 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02001 - - gmx:100812058 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00227 07 1867297 1878315 Gma08g02001 08 18004904 18018997 GST